Gene Dvul_2389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_2389 
Symbol 
ID4663354 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp2786614 
End bp2787621 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content41% 
IMG OID639820637 
Productglycosyl transferase family protein 
Protein accessionYP_967832 
Protein GI120603432 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1442] Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.352127 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACTG TTCCAATAGT TTTTACATTT GATGCAAACT ATAGATTGCC AGCGAGTGTT 
GCCTTACAAT CTCTTTTTGA GAATGCCAAA GATTCTACAT ACTATCATGT ATATCTTGTC
TGCGAAGGAC TTTCTCGTGG CGACAAGGAT GCGATAGAAT CTATCTGTCC TGAAAAAAAC
GGTAGGGTTG AATGGATTGA TGTTGATAAT GAATTGTTTT CTAGCGCGCC AAGCTCAGAG
AATTGGCCGA AGATTGTCTA CGCGAGAATC TTGCTCCCAT TACTTTTGCC ATTTGATAAG
GTTATTTATT CAGATGTCGA TGTGGTTTTT TGTTCTGACT TGGCGGAAAT ATTCCAGATT
GAAGTCGACG GATGTGAGTG GGCAGGTGTA GCTGCAGAGT TGGTTGCATT TCAAGAAGGA
GTTGCTCGTT GCCATAATGT CCATTGTGAG TATCAAAATG AATTAATATA TATGTCTGGT
TTTATGGTTA TGAATTTACG TTTGATGCGT GAGAAGGATA CAGTCGGCAG ATGTCTGAAT
AATATAAGTA AATTCGGAAG CAGACTGAAA ATGTATGATT TGGAAATTCT CAATATGTCG
AGCGATAACA TCGCCCGCAT CGATTTCAGC TACTGTGTTC TAGAGAATGT GTTCTTTGCG
AAGAATGTGT CAGAGGCGAA GGAATACCCA TGGCTTAGAG GACTTTATCG TGTTTCTGAG
CTTGAAGCGG CTCGTAGTGC TCCTAGAATT ATCCATTTTG CTGGTTCGGA CACAAAGGTG
TGGGAGCGCT ATTGTGTGCC GCAAGTGTAT AGAAAGTATC TAGCTGTATC CCCATTTAGA
TCTTGCTATG TTTTTTCGAA TGTTTTCAAA GTGCTTTTGT TGCTTGTTGT GCGGCTTGTT
ACGAAGGTCG TCCCAAAGAA ACAGCGGGGT TTTATTCGCC GCAAGGCTAA ATGGCTGTGC
TCGCAATCTT TTTCATGCTG GTTTCGAAAA GGTTTTCTTG CTAACTGA
 
Protein sequence
MNTVPIVFTF DANYRLPASV ALQSLFENAK DSTYYHVYLV CEGLSRGDKD AIESICPEKN 
GRVEWIDVDN ELFSSAPSSE NWPKIVYARI LLPLLLPFDK VIYSDVDVVF CSDLAEIFQI
EVDGCEWAGV AAELVAFQEG VARCHNVHCE YQNELIYMSG FMVMNLRLMR EKDTVGRCLN
NISKFGSRLK MYDLEILNMS SDNIARIDFS YCVLENVFFA KNVSEAKEYP WLRGLYRVSE
LEAARSAPRI IHFAGSDTKV WERYCVPQVY RKYLAVSPFR SCYVFSNVFK VLLLLVVRLV
TKVVPKKQRG FIRRKAKWLC SQSFSCWFRK GFLAN