| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_2382 |
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| Symbol | |
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| ID | 4663100 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris DP4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008751 |
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| Strand | - |
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| Start bp | 2778591 |
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| End bp | 2780210 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639820630 |
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| Product | sigma-54 dependent trancsriptional regulator |
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| Protein accession | YP_967825 |
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| Protein GI | 120603425 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0222564 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACGTG TGCCAGTTTG CGGGAATCCG GAGGAATGGA TGAAGCTCAA GCTCGAACTG
GTGTTCAAGG ACAGGGTTGG CATCGTCTCG GATGTCTCGT CACTGCTGGC CGGAGAAGGG
TATTCCATCG TCTGCATGGA GGTCGAACGT CGGCATGACC GGTCGCACGT CCATATCGAG
GCCGATGGCG CGGGAGAGGG GGCCTTCGCC GCACTGCGGC AGCGGTTCGA GTCCATGCGG
GGACTGCTCG AATGCCGCGA AGTGCAGACC CTGCCAGCCG AAGAGCGCGA GAACCGCATC
AAGGTGGTGC TCGACACCAT CGGGGATGGC GTCATGTCCA TCGACGGTGG CGGGCGCATC
ACCTCCATCA ACAAAGTCGC CCGCGAGGCC TACGGTTGCG CCGGAGAGGA CGTGACGGAG
CGCAGTCTCA CCTCGCTACG CCTGCCCGAC CATGGGCTTC TCGACTGCCT GCACGGGCGT
GAATTGCACG ACGCCCGACG CGAACTCGCA ACCCCGCTCG GGAAGTTGCA GTTCTTCGTC
ACCCGAACCC CCATACGCGA TGGTGTGGGG CGCATCATCG GCGCGGTGGA GATTGCCCGC
GACATGCGCG AGATACGTAA ACTCGCCCGA ACTCTCGTCG ATGCCGACCA TGTGGGTTTC
GACGACATCG TGGGCCACCA CCCGGCCATC GAAGCCGCCA TCGCCTTCGC ACGCCGGGTC
GCAGCCACGG ATGCCGTCAT CGCCATCAGG GGCGAGTCGG GAACCGGCAA GGAGCTTTTC
GCCCGTGCCA TGCACGCCGA AAGCGGACGC AAGGGACCCT TCGTGCCCAT CAACTGCGCG
GCACTGCCCG AACAGCTTCT GGAGAGCGAG TTGTTCGGGT ACGAGCGCGG GGCCTTCACG
GGCGGCAGGC GTGAGGGCAA GCCGGGGCTT TTCGAATCGG CGCGTGGCGG CACTGTCTTC
CTCGACGAAA TCGGCGACAT GCCCCTTGCC TCGCAAGCCA AGATTCTGCG CGTGATGCAG
GAACAGAGGG TGCGCCGCAT CGGCGGAGAG GCCGAAGTGC CTGTGGATGC GCGCATCATC
ACGGCGACGA ACAGACCCCT TGAGCGCATG GTCGAGGATG GACGTTTCCG GCAAGACCTC
TACTATCGCA TCAACGTACT GCCCATGCAC ATACCGCCCC TGCGCGAACG ACGCGGGGAT
ATCCCGTTGC TGGCGAATCA CTTCCTGCAG CAACTCGCGT CACGCATCGG CGGGGCCGCC
CCGGCGTTCA CCGACGGGGC GCTGGCCCGG CTGCGGTCGC ATGAATGGCC GGGAAACGTG
CGCGAACTCA AGAACGTGGT GGAACGTGCC GCCATCCTTG CCGGTGGTGC CGTGGTGGAC
GACCAGTTCA TCCTGTTCAG TCATGAGTTG GGCAAGGGCG TGTTCAACGC GGCGCGCACA
GCCTCTGCTG CGGGGCAGGG CGATACTCTG AAGGAGCAGG TTGCCAATTT TGAAAAGAAA
ATCGTCGAAG ATGTGGTCCG CCGCGCACCT TCCATTCGAA AGGCAGCGAA AATACTAGGA
ATATCGCACA CGGCGCTTCT CGATAAGATG CGGCGTCACG GCGTCATTCT GGAAGAATGA
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| Protein sequence | MARVPVCGNP EEWMKLKLEL VFKDRVGIVS DVSSLLAGEG YSIVCMEVER RHDRSHVHIE
ADGAGEGAFA ALRQRFESMR GLLECREVQT LPAEERENRI KVVLDTIGDG VMSIDGGGRI
TSINKVAREA YGCAGEDVTE RSLTSLRLPD HGLLDCLHGR ELHDARRELA TPLGKLQFFV
TRTPIRDGVG RIIGAVEIAR DMREIRKLAR TLVDADHVGF DDIVGHHPAI EAAIAFARRV
AATDAVIAIR GESGTGKELF ARAMHAESGR KGPFVPINCA ALPEQLLESE LFGYERGAFT
GGRREGKPGL FESARGGTVF LDEIGDMPLA SQAKILRVMQ EQRVRRIGGE AEVPVDARII
TATNRPLERM VEDGRFRQDL YYRINVLPMH IPPLRERRGD IPLLANHFLQ QLASRIGGAA
PAFTDGALAR LRSHEWPGNV RELKNVVERA AILAGGAVVD DQFILFSHEL GKGVFNAART
ASAAGQGDTL KEQVANFEKK IVEDVVRRAP SIRKAAKILG ISHTALLDKM RRHGVILEE
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