Gene Dvul_2318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_2318 
Symbol 
ID4662840 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp2702348 
End bp2703463 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content61% 
IMG OID639820564 
Producthypothetical protein 
Protein accessionYP_967761 
Protein GI120603361 
COG category[L] Replication, recombination and repair 
COG ID[COG1315] Predicted polymerase, most proteins contain PALM domain, HD hydrolase domain and Zn-ribbon domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00575561 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCATACT CACTGAACGT GCTGATACCT CTCTCATGCG ACCTGCGCCC TCCGGTACCG 
CAGGCCATTC ATGCTGGCAG GGTAGACCAC CGCGAATTGG GTTTCGTCCA TCCGGTCTCG
CCGGGTGATG TCGTAGCCGA AGTGCTCGTT CCCGCCGGGG AACGCTTCTC GCCGGAGGTG
GCACAGCACC TGATAGGCGA AGGCTGTGCC CTTGGTGATG CAAGCACGGA ACATACCGAG
GGGCAAGGCG TGCCCGTGGT GGCCACGCGA AGCGGGCATC TCGACTGGGA TGAACGGGCG
CTCGCAGTGC GCGACACCCT TGTCGTGGAC GAGGATGTCA CCTACCATGT AGGAAATATA
CGCTATTTCG GTGATCTCAT CGTCCGGGGA ATGGTACGTG TGGCCTTTCG GGTACGCGCA
CGTTCCCTGC TGGTAGAAGG CCTCATCGAA GGTGCCTTCA TCGAATGTGA ACGGCTTGAG
GCGCGAGGAG GCGTCAAGGC CGGGGGTAGC GGAAGGCTTC GCGTCCGGGA GACGGTGGCA
GCCCCTTTCA TGGAGAACGC CATCGTCCAT GCCGGAAGCC ATGTTGTCGT ATCGGGCTCG
TCCCTGCACA ATGAAATCAA GTCCAACGCA TCCGTACAGG TCGCTGAACG ACTCATAGGC
GGCATGACCG CTGCACGGGA CTCGATCACA GTTGGAGAAC GACTGGGGGG CGGCATGTCG
ACACTCACCC GCGTGCAGGT AGGCTACGAC CCGTTCCTCA ACACTGCCGT GCACAGGCTT
GAAGTGCAGG CACAGCACGT CGAAGAGGTC ATGCTCTCCT GCGCCAAGCT GGCGGGACGG
GGTGGCAGGC TGGGCGACAA GGCGAAGGCC CGCGGAGAAC GCTATGCAGC CGCACTGAAA
AGGTTGCGGC GCAAGCTTGC AGACCTGCTG GCCAGACTTG ACGCCACATC GACACTTGAA
ACATGCACGA TCGATGTCCG GGGTGAGGTG CGCCCGGGAG TCGAAATCTG CATCGGCCCG
GCGCGTCTGA TGAATCAGGA CTTTCTGAAA AACGTACGGT TCTCGTATTG CGACGGCGCG
GTGGTAGCAA CCCACCCGGC AGGACGGACA GCATAG
 
Protein sequence
MPYSLNVLIP LSCDLRPPVP QAIHAGRVDH RELGFVHPVS PGDVVAEVLV PAGERFSPEV 
AQHLIGEGCA LGDASTEHTE GQGVPVVATR SGHLDWDERA LAVRDTLVVD EDVTYHVGNI
RYFGDLIVRG MVRVAFRVRA RSLLVEGLIE GAFIECERLE ARGGVKAGGS GRLRVRETVA
APFMENAIVH AGSHVVVSGS SLHNEIKSNA SVQVAERLIG GMTAARDSIT VGERLGGGMS
TLTRVQVGYD PFLNTAVHRL EVQAQHVEEV MLSCAKLAGR GGRLGDKAKA RGERYAAALK
RLRRKLADLL ARLDATSTLE TCTIDVRGEV RPGVEICIGP ARLMNQDFLK NVRFSYCDGA
VVATHPAGRT A