Gene Dvul_2307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_2307 
Symbol 
ID4663131 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp2687950 
End bp2689635 
Gene Length1686 bp 
Protein Length561 aa 
Translation table11 
GC content67% 
IMG OID639820553 
Producttwo component, sigma54 specific, Fis family transcriptional regulator 
Protein accessionYP_967750 
Protein GI120603350 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.326689 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCACG TGCTGGTCAT AGACGGCGAC CCGGCGTTCG CCCAACTGGT GGCCGACTTC 
GCCGCCGGAC TCGGCCACAC CTCGCGTCAC GCACCCACGC TGGCGGAAGG ACTTCTGGCA
GCCACGGAGG CGGACGTCAT CTACCTCGCC GCCAGCCTGC CCGACGGCTG CGGGCTTGAA
GCCCTTGCGG GGCTTCGCGC CCTGCCATCC GCCCCCGAGG TCATCGTGAC AGGTGCGGCA
GGCAACCCCG ACACGGCCGA GAAGGCCATC CGGGGGGGTG CATGGGAATG GCTTTGCAAG
CCCGCCCCCG TGGACAGGGT GGTGCTGCCG CTACTGCGCG CACTGGACTA CCGGGACAGA
CCCCCCGACA GACGCGGGCC CTCCATCCTC AAGCACGCCA TCGTGGGGTC CAGCCGCGGG
CTGCGACGGT GCCTCGACGA TGTGGCCGAA GCCGCGGCCA GTGACGCCGC GACCCTCATC
GTGGGAGAGA CCGGTGTGGG CAAAGAGCTT TTCGCCCGCG CCGTTCACGA GAACAGCCAC
CGTGCCGACT CGCCGTTCAT CACCGTCGAC TGCGCCTCGC TGCCACGGAC ACTGGCCGGG
TCGATTCTCT TCGGGCATCG CAAGGGCGCC TTCACGGGGG CCGACGCCAA CCGGGACGGA
CTCGTCCTTC AGGCGCACCG TGGCACGCTG TTTCTCGACG AAGTGGGTGA ACTTCCGCTC
GCGACCCAGA AGATGTTCTT GCGCGTCTTG CAGGAGCAGA GGTTCAGGGC CGTAGGCGGC
AGAAGCGAAA TAACGAGCGA CTTCAGGCTT ATTTGCGCCA CGAATCGCAA CCTTGAAGCC
ATGAGCGACA AGGGACTGTT CCGCAGCGAC CTGCTTTTCC GGATGCGGAC CGTGGTCATC
TCCATTCCTC CACTACGTGA ACGCCCTGAC GACATCCTCG CCCTCACCGG GCACTACCTC
GCCCGCATCT GCAAGAAGTA CGGGCTACCC GCAAAACAGG TATCGCCCGA CCTGCACGAG
GCGCTTCGCG CCTACCGCTG GCCCGGCAAC GTGCGCGAAC TCGTGCACAC CCTCGAAAGG
GCCGTGCTTG CGGCGCAGGA CGCACCGAAA CTCTTCGCCC GCCATTTGCC CGAACACGTC
CGGGTGAGCA TCGCACGAGG CATGTCGGGC CAGCGCCCCG CCCTCGTCAG TGGCACAGGC
CCCGCCCAGA GACCGGCTGC ACCGGGCGGT TTCGGTCAGG TAGCCGAGAC CTCCCGCGCC
GTGACCGCGA CTCATGACGC TCATGCACTG GCGGCGATGA CACCTCTTGC CCGAAGGCTG
GACACCGCGC CCGCCGCGCC CGACAACAAT CGGCAAAGCC CCCTGCAAGA GGCCACCCCG
CCGGTCTCAC CGGGGGGCAC GACAGATGTC TCGCCGGACG GACATCCCCC TGTCCGCCTC
CGGACAACCC CTCTCTCTGA CGGCCCGACA GCCGGATTCG CTTCCGACGT GCCCTTGCCT
CCATTCTTCG CCTTCCGTGA CGCGCTGTGC GTGGACTACC TGAATGAGCT CATGCGGCGC
TGCAACGGCG ACACCGTCGA AGCCTGTACC CTGTCCGGCC TTTCGCGGTC ACATCTGTAT
GAGATGTTAA GGCGTTATGG ATTCGAGACC CCTCGCAGGA AGCGGACGCA ACGGGCCAGA
AGCTGA
 
Protein sequence
MAHVLVIDGD PAFAQLVADF AAGLGHTSRH APTLAEGLLA ATEADVIYLA ASLPDGCGLE 
ALAGLRALPS APEVIVTGAA GNPDTAEKAI RGGAWEWLCK PAPVDRVVLP LLRALDYRDR
PPDRRGPSIL KHAIVGSSRG LRRCLDDVAE AAASDAATLI VGETGVGKEL FARAVHENSH
RADSPFITVD CASLPRTLAG SILFGHRKGA FTGADANRDG LVLQAHRGTL FLDEVGELPL
ATQKMFLRVL QEQRFRAVGG RSEITSDFRL ICATNRNLEA MSDKGLFRSD LLFRMRTVVI
SIPPLRERPD DILALTGHYL ARICKKYGLP AKQVSPDLHE ALRAYRWPGN VRELVHTLER
AVLAAQDAPK LFARHLPEHV RVSIARGMSG QRPALVSGTG PAQRPAAPGG FGQVAETSRA
VTATHDAHAL AAMTPLARRL DTAPAAPDNN RQSPLQEATP PVSPGGTTDV SPDGHPPVRL
RTTPLSDGPT AGFASDVPLP PFFAFRDALC VDYLNELMRR CNGDTVEACT LSGLSRSHLY
EMLRRYGFET PRRKRTQRAR S