| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_2292 |
|---|
| Symbol | |
|---|
| ID | 4663010 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris DP4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008751 |
|---|
| Strand | - |
|---|
| Start bp | 2673118 |
|---|
| End bp | 2674704 |
|---|
| Gene Length | 1587 bp |
|---|
| Protein Length | 528 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639820538 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_967735 |
|---|
| Protein GI | 120603335 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGGTT TTCGTGCGCT GTATATTCCC GCCAGCATCC TTACGGTGCT GGTCCTGATC
GCTATCGGGG GCTTCTGGTG CATCGCCGCC AAGGCAGGGA CCGGTCCCCT TGAGGCAGGA
GCGGTGTGGC GAGTCGCCGC TGCGACGCTC GCCCTGGTCG TCGCTTGCGT GGCCGCTCTG
TGCATATGGT TCGGCGTAGC CATCCGCAGG CCCATCGATG ATGTCATGAC GCGACTCGAC
CGCATGCTCG ACGGTGATAC GAAGCTCTGC TTCGCTTGCG ACAAGGTCGA CGCCTTCGGG
GAGATGCGGC TTGCGCTCGA TACGCTCGTG GGCAGGTTGC GGCAGAATCT CGGGTTCGCA
CAGGGGGTGC TCAAGGGCAT CGATACGCCC TTTGTCGTGG TCGACGCGCA TGAGAAACTC
TCCTACACCA ACAGCAACCT GCTGGACATC CTGCAACATG ACGGTCGGCC GGAAGACTAC
TACGGCCAGA ACGTGGCCCA TTTCTTCTAC GGCGATGCAA GCAGGCGCAC CGTTCTGCGC
GACAGCATCG AGCAGGGCAC CATCGCCCGC CGTGAGGTCG ACCTCGTGGG GCGCAAGGGG
GGCAAGCGCA GGCTGCATAT CAACGCATCG CCGCTCTACG ACCTTGACGG CACACTCATG
GGCGCGCTGT GTATCTATCA GGATCTTACG GAGTTGCGCG CACGCGAGGC CGAGTTGAGT
GCCCAGAATG CGCGTATCGC CGAAGCTGCC GCCACGTCGG AAGCCATTTC CGACGAGGTC
GCCCGCACTG CCGCCGCACT CGCTGAACAG GTGCGGGGTG CCAGCGGGGT TGCCGTGCAG
CAGTCGCAGC GTGCACGTGA GGCCACCATC GCCATGGAAC AGATGAACGA TGCTGTGCTT
TCCGTGGCGC GAAGCGCTTC CGAGGCCGCT TCAGAGGCCG AGGCGGCACG CAGACGTGCC
GAGGGCGGCG CAGATGTCGT ACGCAACGCC ATGGCCGCCA TCGACGAGGT CGACCGTCTC
GCCGCCGGAC TCAAGCAGCA ACTCGGTGAC CTTGGTGGAA GGGCCGATGG TATCGGGCGC
GTCATCGACG TCATCTCCGA CATCGCCGAC CAGACCAACC TGCTTGCCCT CAACGCCGCC
ATCGAAGCGG CCCGTGCAGG GGATGCGGGG CGCGGCTTCG CCGTCGTTGC GGACGAGGTA
CGCAAACTGG CCGAAAAGAC GATGCAGGCC ACGCAGGAAG TGGGCAACGC CATCCGTGCC
ATTCAGGAAG GGACCCGTTC CGCCGTACAG GGCATGGAGA CCGCCGTTGG GGCTGTGGAA
CGGTCGCGCG AGCTCTCGGC ACAGTCGGGC GAGGCCTTGT CAGGCATCGT CGAACTGGTC
GTGCAGAGCA GCGATCAGGT ACAGTCCATC GCCGCGGCAG CGGAGCAGCA GTCCTCCACC
AGCGAGAGCA TCAACAGGTC GGTCGAAGCC GTGCGCGAGA GTGCAGATGG TCTTACTGGC
GAGATGGAAG CGGCTGGCAG GGCTGTGCGT TCCCTTGCCG AGATGACCGG CAGACTGCAC
GACCTTGTGC ACGGGATGGC GGTCTAG
|
|---|
| Protein sequence | MQGFRALYIP ASILTVLVLI AIGGFWCIAA KAGTGPLEAG AVWRVAAATL ALVVACVAAL
CIWFGVAIRR PIDDVMTRLD RMLDGDTKLC FACDKVDAFG EMRLALDTLV GRLRQNLGFA
QGVLKGIDTP FVVVDAHEKL SYTNSNLLDI LQHDGRPEDY YGQNVAHFFY GDASRRTVLR
DSIEQGTIAR REVDLVGRKG GKRRLHINAS PLYDLDGTLM GALCIYQDLT ELRAREAELS
AQNARIAEAA ATSEAISDEV ARTAAALAEQ VRGASGVAVQ QSQRAREATI AMEQMNDAVL
SVARSASEAA SEAEAARRRA EGGADVVRNA MAAIDEVDRL AAGLKQQLGD LGGRADGIGR
VIDVISDIAD QTNLLALNAA IEAARAGDAG RGFAVVADEV RKLAEKTMQA TQEVGNAIRA
IQEGTRSAVQ GMETAVGAVE RSRELSAQSG EALSGIVELV VQSSDQVQSI AAAAEQQSST
SESINRSVEA VRESADGLTG EMEAAGRAVR SLAEMTGRLH DLVHGMAV
|
|---|
| |