Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dvul_2218 |
Symbol | |
ID | 4664321 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris DP4 |
Kingdom | Bacteria |
Replicon accession | NC_008751 |
Strand | + |
Start bp | 2570426 |
End bp | 2571253 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639820463 |
Product | extracellular solute-binding protein |
Protein accession | YP_967661 |
Protein GI | 120603261 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.120709 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.459989 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTCTTG GAAAGATCAT CGCCCTTGCC GCGGCCTTTC TGGTCTTCAC CGGCTCTGCG GCCCTTGCCG GCCCCGCCTA TGACAACGTG ATGAAGGACA AGAAGATCCG CGTCGGCCTC ATGACCGACT CCATCCCCGG CGGCTTCTAC AACGAGAAGG GCGAATGGGG CGGCTTCGAC TACGACATCG CCACCGAAAT CGCCAAGCGC ATGGGCGTGG ACATCGAGCG TGTGCAGGTC AACAACAAGA CCCGCATCGC CTACGTCCAG CAGGGCCGCG TCGACATCTC CGTGTCGAAC ATGACCCACA CCCGTGAGCG CGACAAGTCG GTCGACTTCT CCATCACCTA CTTCTTCGAC GGTCAGAAGG TCCTCGCCAA GAAGGGCCAG TTCAAGTCAG TGAAGGACAT GGTGGGCAAG AAGATCGCCA CCATGCAGGG CACCACTTCC GAAGTGAACG TGAAGCGCGC CCTCAAGGAA GCCGGTGACC CCAACCCCGA CCAGAGCGTC ATCTCCTTCC AGAAGGAGTC CGAGTGCTTC CAGGCTCTGC AGATGGGTCG CGTGGCCGGC TGGTCGACCG ACGCCTCCAT CCTCGTGGGC TACTCCGCGA AGGAACCCGG CAAGTTCGAA CTGGTGGGCA ACTTCCTCGC CGAAGAGCCC TACGGCATCG CCATGCCGCA GGACGACTCC GCCCTGCGTG ACGCCGTGAA CGCCGCCCTG CAGGACATGT GGAAGGACGG TACCTACAAG ACCATCTACA ACAAGTGGTA CGGCCCCGGC ACTCCCTTCG AAATGCCCCT CGCCGGTCAG ATCGAAATGT GGCCCTAA
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Protein sequence | MRLGKIIALA AAFLVFTGSA ALAGPAYDNV MKDKKIRVGL MTDSIPGGFY NEKGEWGGFD YDIATEIAKR MGVDIERVQV NNKTRIAYVQ QGRVDISVSN MTHTRERDKS VDFSITYFFD GQKVLAKKGQ FKSVKDMVGK KIATMQGTTS EVNVKRALKE AGDPNPDQSV ISFQKESECF QALQMGRVAG WSTDASILVG YSAKEPGKFE LVGNFLAEEP YGIAMPQDDS ALRDAVNAAL QDMWKDGTYK TIYNKWYGPG TPFEMPLAGQ IEMWP
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