Gene Dvul_2218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_2218 
Symbol 
ID4664321 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp2570426 
End bp2571253 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content62% 
IMG OID639820463 
Productextracellular solute-binding protein 
Protein accessionYP_967661 
Protein GI120603261 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.120709 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.459989 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCTTG GAAAGATCAT CGCCCTTGCC GCGGCCTTTC TGGTCTTCAC CGGCTCTGCG 
GCCCTTGCCG GCCCCGCCTA TGACAACGTG ATGAAGGACA AGAAGATCCG CGTCGGCCTC
ATGACCGACT CCATCCCCGG CGGCTTCTAC AACGAGAAGG GCGAATGGGG CGGCTTCGAC
TACGACATCG CCACCGAAAT CGCCAAGCGC ATGGGCGTGG ACATCGAGCG TGTGCAGGTC
AACAACAAGA CCCGCATCGC CTACGTCCAG CAGGGCCGCG TCGACATCTC CGTGTCGAAC
ATGACCCACA CCCGTGAGCG CGACAAGTCG GTCGACTTCT CCATCACCTA CTTCTTCGAC
GGTCAGAAGG TCCTCGCCAA GAAGGGCCAG TTCAAGTCAG TGAAGGACAT GGTGGGCAAG
AAGATCGCCA CCATGCAGGG CACCACTTCC GAAGTGAACG TGAAGCGCGC CCTCAAGGAA
GCCGGTGACC CCAACCCCGA CCAGAGCGTC ATCTCCTTCC AGAAGGAGTC CGAGTGCTTC
CAGGCTCTGC AGATGGGTCG CGTGGCCGGC TGGTCGACCG ACGCCTCCAT CCTCGTGGGC
TACTCCGCGA AGGAACCCGG CAAGTTCGAA CTGGTGGGCA ACTTCCTCGC CGAAGAGCCC
TACGGCATCG CCATGCCGCA GGACGACTCC GCCCTGCGTG ACGCCGTGAA CGCCGCCCTG
CAGGACATGT GGAAGGACGG TACCTACAAG ACCATCTACA ACAAGTGGTA CGGCCCCGGC
ACTCCCTTCG AAATGCCCCT CGCCGGTCAG ATCGAAATGT GGCCCTAA
 
Protein sequence
MRLGKIIALA AAFLVFTGSA ALAGPAYDNV MKDKKIRVGL MTDSIPGGFY NEKGEWGGFD 
YDIATEIAKR MGVDIERVQV NNKTRIAYVQ QGRVDISVSN MTHTRERDKS VDFSITYFFD
GQKVLAKKGQ FKSVKDMVGK KIATMQGTTS EVNVKRALKE AGDPNPDQSV ISFQKESECF
QALQMGRVAG WSTDASILVG YSAKEPGKFE LVGNFLAEEP YGIAMPQDDS ALRDAVNAAL
QDMWKDGTYK TIYNKWYGPG TPFEMPLAGQ IEMWP