Gene Dvul_2108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_2108 
SymbolrpsB 
ID4662725 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp2449578 
End bp2450342 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content61% 
IMG OID639820351 
Product30S ribosomal protein S2 
Protein accessionYP_967551 
Protein GI120603151 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0052] Ribosomal protein S2 
TIGRFAM ID[TIGR01011] ribosomal protein S2, bacterial type 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTACG TCAGCATGAA GCAAATGCTG GAGACGGGTG TCCACTTCGG CCACCAGACC 
CGCCGCTGGA ACCCCAAGAT GCGTCCTTTC ATCTTCGGCG CCCGTAACGG CATCCATATC
ATCGACCTTC AGCAGACCGT GAAGATGTTC CGCGTCGCCC ATGATAAGGT GGTCGACACC
GTCGCCAACG GCGGCCGCGT GATGTTCATC GGCACCAAGC GTCAGGCGCA GGAAGCCGTG
GCCACCGAAG CCGGTCGCGC CGGTCAGTTC TACGTGACCA ACCGTTGGAT GGGCGGCACG
CTCACCAACT TCTTCACCAT CCAGAAGAGC ATCGACCGTC TGAAGAAGCT TGAGGCCATG
TTCGCCGACG GCACCGTCAA CCGTTACCAG AAGAAGGAAA TCCTTCGCCT CCAGCGCGAA
ATGGACAAGC TTCTGGCGAC CCTCGGCGGT ATCAAGGACA TGGACAAGCT GCCCCAGCTC
GCCTTCGTCA TCGACCCCCA CCGCGAAGAC ATCGCCATCA AGGAATGCCG CAAGCTCGGC
ATCCCGATCG TGGCTGTCAC CGATACCAAC TGCGATCCCG ACCTCATCGA CTTCGTCATC
CCCGGTAACG ACGACGCCAT CCGCGCCATC AAGCTCTTCG TCGCCGCCAT CGCTGACGCC
TGCCTCGAAG GCGACGCCCT CCGCAAGGAA CGCAAGGGTC AGGACGCCGA AGAGGAACTG
AAGAAGGCCA GCGAGCCCAA GGCCGCAGAA GCCGCCGCCG AGTAA
 
Protein sequence
MAYVSMKQML ETGVHFGHQT RRWNPKMRPF IFGARNGIHI IDLQQTVKMF RVAHDKVVDT 
VANGGRVMFI GTKRQAQEAV ATEAGRAGQF YVTNRWMGGT LTNFFTIQKS IDRLKKLEAM
FADGTVNRYQ KKEILRLQRE MDKLLATLGG IKDMDKLPQL AFVIDPHRED IAIKECRKLG
IPIVAVTDTN CDPDLIDFVI PGNDDAIRAI KLFVAAIADA CLEGDALRKE RKGQDAEEEL
KKASEPKAAE AAAE