| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_1976 |
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| Symbol | |
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| ID | 4663420 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris DP4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008751 |
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| Strand | - |
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| Start bp | 2295494 |
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| End bp | 2296840 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639820217 |
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| Product | HlyD family type I secretion membrane fusion protein |
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| Protein accession | YP_967419 |
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| Protein GI | 120603019 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCTGT TCCAATGGAA AAAACGCGAC AGTGTTGCGA GGGAAGACGT ACAATTCATG
AGCGAGGTCG ATGCAGCCTT GCATCGGGCC GGGCATCCTT ATGCCTACCT GCTTTCGTGC
GCCATCTTCG GCGTGTTCGC CATCTTTTTC GTGTGGGCGG CTTTCGCCCC GCTGGATGAG
GTCACGCGCG GACAGGGGCA GGTCATTCCC TCGCAGCGTG TACAGGTCAT CCAGAACCTC
GAAGGCGGCA TCCTGCGCGA ACTGCTCGTC CATGAGAGCC AGATTGTGGA AAAGGGCGAC
GTGCTGCTGC GTATCGACAA CGAAGCAGCC GAGAGTTTCT ACCGCGATGC CCTTGGCAAG
TCCGTCGAAC ACCAGATTGC CATCGCCCGC CTCGAAGCCG AACTCGAAGG GCGTGACCCC
GTGTATCCTG CTGAACTCAT GACCGAATGG CCTCAGGTCG TGGAGAACCA GGCGGATGTC
TACCGGGCGC GAAGACAGCA GGTCGCCGTC GAACAGAGGG TCCTCGAAGC GCAGCTGCAC
CAGAAGGAGC AGGAAATCGA GGAGATGACG AGCCGCAAGC GACAGCTTGA AGATTCGTTG
CGCGTCGCCG TGGAGCAACG TGAAATCGCC CGCCCGCTCA TGGAGAAGCA GATATACCCG
CGCGTCGAGT ACCTTTCGCT CGAGCAGAAG GTCATCTCCC TGCGAGGCGA GATAAGCTCG
CTTGCCATAT CCATTCCCAA GGCCCGCGCG GCAGCGGATG AGGCCAAGGA ACGCCTCGCC
TTCCGCAAGG CACAGATACG TTCCGAGGCG CTTGAGGAAC TCAACAAACG ACGGGGCGAG
TTGAACTCCC TGCGTGAGAC GCTTTCTGCC GGGGGCGACC GGGTGACACG TACCGACGTG
CGCAGCCCGG TGCGAGGAAC GGTCAAGCGG CTCATCATCA ATACTGTCGG GGGGGTCATC
AAACCGGGTG AGCCCATCAT GGAAATCGTG CCACTGGATG ACACCCTGCT CATCGAGGCC
CGGATACGCC CCGCCGACAT CGCCTTCCTG CATCCCGACC AGAAGGCCGT GGTCAAGATA
ACGGCCTATG ACTATTCCAT CTACGGGGGG CTTGAAGGGG TCGTCGAACA GATAAGCGCC
GACACCATCG AGGACAGGAA GGGCGAGTTC TACTATCTGG TGAAGTTGCG CACCCGCAAG
AGTGCCATCG TGTATCGGGG TGAGGCGCTG CCCATCATGC CCGGTATGAC CGCAACCGTG
GATATTCTCA CAGGCAAGAA GACGGTTCTC GATTATCTGC TCAAGCCCAT CCTCAAGGCA
CAGCAGAATG CCCTGCGGGA GCGTTGA
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| Protein sequence | MPLFQWKKRD SVAREDVQFM SEVDAALHRA GHPYAYLLSC AIFGVFAIFF VWAAFAPLDE
VTRGQGQVIP SQRVQVIQNL EGGILRELLV HESQIVEKGD VLLRIDNEAA ESFYRDALGK
SVEHQIAIAR LEAELEGRDP VYPAELMTEW PQVVENQADV YRARRQQVAV EQRVLEAQLH
QKEQEIEEMT SRKRQLEDSL RVAVEQREIA RPLMEKQIYP RVEYLSLEQK VISLRGEISS
LAISIPKARA AADEAKERLA FRKAQIRSEA LEELNKRRGE LNSLRETLSA GGDRVTRTDV
RSPVRGTVKR LIINTVGGVI KPGEPIMEIV PLDDTLLIEA RIRPADIAFL HPDQKAVVKI
TAYDYSIYGG LEGVVEQISA DTIEDRKGEF YYLVKLRTRK SAIVYRGEAL PIMPGMTATV
DILTGKKTVL DYLLKPILKA QQNALRER
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