Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dvul_1970 |
Symbol | |
ID | 4663577 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris DP4 |
Kingdom | Bacteria |
Replicon accession | NC_008751 |
Strand | + |
Start bp | 2288742 |
End bp | 2289482 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639820211 |
Product | rhomboid family protein |
Protein accession | YP_967413 |
Protein GI | 120603013 |
COG category | [R] General function prediction only |
COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTCCCCC TGCGCGACAC CATCCCCAGA GTCCATACGC CGTGGGCCGT CTGGACGATT CTCGGCCTGA ACCTTGCGGT CTTCCTGTGG CAGCAGGGAC TTGCCCCTTC GGAGGTATAC ACGGTCTTTC ATGTCTTCGG TGTCGTGCCC GCCCGCTTCT CGTTCCCCGA CTGGGCACTT TCGGCTGGTT TCCCGCCCGG CGGCGAAGCC AGTTTCTTCA CGCATATGTT CCTGCATGGC GGCTGGGGGC ACTTTCTCGT CAACATGTGG ACATTATGGA TCTTCGGCGA CAACATCGAA GATGTCATGG GCCCGTGGCG GTTCACGGTG TTCTATCTCA CGTGCGGTCT GGCAGCGCTG TTCACACATG TCTTCTTCTC CCCCGCATCG ACGATACCGG TCGTCGGTGC CTCGGGCGCC ATTGCAGGTG TTCTCGGCGC GTATTTCCTC CTGTACCCCC ACGCGCGGGT CACGACGCTT GTACTTCTGG TCTTCATCCC GCTGGTGTTC GACCTGCCCG CCCTCGTGTA CCTCGGCATC TGGTTTCTCG TACAGTTGGC CTCCGGCCTT TCCGCCCTCG GAGACGAGGG CGCGGGCATC GCATGGTGGG CCCACCTTGG CGGCTTCATC GCCGGAGTGC TGCTTCTTCC GCTGTTCCGC AAACCCGAAC GCTGCTACTT CTGCTCCCCT CACGGCCCTT TCGGGCGTAG CAGAAAGGCT GTTCCTCCCT TGCAGGACTG A
|
Protein sequence | MFPLRDTIPR VHTPWAVWTI LGLNLAVFLW QQGLAPSEVY TVFHVFGVVP ARFSFPDWAL SAGFPPGGEA SFFTHMFLHG GWGHFLVNMW TLWIFGDNIE DVMGPWRFTV FYLTCGLAAL FTHVFFSPAS TIPVVGASGA IAGVLGAYFL LYPHARVTTL VLLVFIPLVF DLPALVYLGI WFLVQLASGL SALGDEGAGI AWWAHLGGFI AGVLLLPLFR KPERCYFCSP HGPFGRSRKA VPPLQD
|
| |