Gene Dvul_1956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_1956 
Symbol 
ID4663749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp2274865 
End bp2276307 
Gene Length1443 bp 
Protein Length480 aa 
Translation table11 
GC content65% 
IMG OID639820197 
Productpyridine nucleotide-disulphide oxidoreductase dimerisation region 
Protein accessionYP_967399 
Protein GI120602999 
COG category[C] Energy production and conversion 
COG ID[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTACG ACGCCGACCT GTTGATCATC GGGGGCGGGG CCGCAGGGTT GACTGTGGCC 
GCCGGTGCGG CCCGGCTGGG TGCCCGTGTG GTTCTGGCCG ACAGGGGGCC GACCCTTGGC
GGAGACTGCC TTCATCATGG CTGTGTGCCC AGCAAGACGC TCATCGCCTC GGCAAGGGCA
CGGAGGACCA TGCGTGATGC CCCACGTTTC GGGTTGCCGG AGGTGGCACT CCCCCCCGTG
GACTTCAAGG CCGTAGCCGC GCATATCGCG GGGGTGCAGT CTGTCATCCA GAAGCACGAT
TCCGTCGAGC GCTTCAGCGG GTTGGGGGTC GAGGTGCGCT TCGGCGATGC GGTGTTCGTC
GATGAGCATA CCGTGGCGGT GGAAGGACGA CGCATTTCGG CGAGGCGCAT CGTGGTGGCA
ACGGGGTCGT CTCCGCAAAT CCCCGCCTTC CCCGGTCTCG CAGATACCCC CTATCTGACC
AATCGTGACA TCTTCACGCT TGAGACGCTG CCCGCATCCC TGATTGTGCT GGGGGGCGGC
CCCATCGCTG TCGAGATGGC ACAGGCCTTC GCGCGGCTTG GTTCGCAGGT GGTGCTCGTC
CAGCGGGGGG GGCACATCCT TTCGCGTGAG GATGCCGATA TGGCGGCGGT CGTCCATGAG
GCCCTAGAAC AGGACGGCGT GCGCATCATG ACAGGGGCGA CGGTCGAGGT TGTCCGTCGT
CAGGACGCCG GTGTTGTCGT GACCGTGCGG GTGGGCGATG AGCATGTCGA CGTTCACGGA
GAGCGTCTTC TTGTCGCGCT CGGTCGTACG CCGAATGTCG AAGGACTGCA CCTTGGCAAT
GCCGGTGTGG TCTTCTCTGA ACGTGGCGTG CCGGTGGACG CCCGGATGAG GACGTCGCAG
TCGCATATCC TTGCGGCGGG CGATGTCACA GGGGAGTGGC AGTTCACCCA TGCAGCCGGG
TACGAGGGGT CGGTCGTGGT CGCCAATGCC GTGTTGCGTC TGCCGCGCAA GGCGAAGTAC
GACCGGATGC CGTGGTGCAC GTTCACCGAC CCGGAATTGG CCTCTGTGGG GCTCAATGAG
CGCGAAGCGC ATCGTCAGGG CATCGGCGTG GACGTGCATA CCGAATCGTT CTCCAGTAAT
GACAGGGCGC TGGCAGAAGG AACGGCCTGC GGGCTTTTGA AGCTGGTTCT CGCACGCGGG
ACGCAGCGGG TGCTTGGTGT CCAGATTGCG GGACCGCACG CAGGCGAACT CATCAACGGC
TGGTGCATGG CGCTTGGCGG CGGGGTAAGG TTGACCACCC TCGCCGGAGG GGTCATGCCC
TATCCCACAC TGGGTGAGAT TTCCCGCCGG GTGGCGGGGA ACATCGTCTC AGAGGCGTTG
TTCTCCGACA AGGTTCGCAA TGTGCTCTGT ACTCTTTTCC GTTACCGCGG CAAGGGCTGC
TGA
 
Protein sequence
MDYDADLLII GGGAAGLTVA AGAARLGARV VLADRGPTLG GDCLHHGCVP SKTLIASARA 
RRTMRDAPRF GLPEVALPPV DFKAVAAHIA GVQSVIQKHD SVERFSGLGV EVRFGDAVFV
DEHTVAVEGR RISARRIVVA TGSSPQIPAF PGLADTPYLT NRDIFTLETL PASLIVLGGG
PIAVEMAQAF ARLGSQVVLV QRGGHILSRE DADMAAVVHE ALEQDGVRIM TGATVEVVRR
QDAGVVVTVR VGDEHVDVHG ERLLVALGRT PNVEGLHLGN AGVVFSERGV PVDARMRTSQ
SHILAAGDVT GEWQFTHAAG YEGSVVVANA VLRLPRKAKY DRMPWCTFTD PELASVGLNE
REAHRQGIGV DVHTESFSSN DRALAEGTAC GLLKLVLARG TQRVLGVQIA GPHAGELING
WCMALGGGVR LTTLAGGVMP YPTLGEISRR VAGNIVSEAL FSDKVRNVLC TLFRYRGKGC