| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_1929 |
|---|
| Symbol | |
|---|
| ID | 4664968 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris DP4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008751 |
|---|
| Strand | - |
|---|
| Start bp | 2246356 |
|---|
| End bp | 2248245 |
|---|
| Gene Length | 1890 bp |
|---|
| Protein Length | 629 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639820170 |
|---|
| Product | PpiC-type peptidyl-prolyl cis-trans isomerase |
|---|
| Protein accession | YP_967372 |
|---|
| Protein GI | 120602972 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.292959 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0390357 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGACG TCATACGTGG GCACGCCCAG TCTTGGGGCG TCAAGGTCGC CTTCGGCCTC
ATCATTGTCG TCTTCGTGTT CTGGGGCGTC GGCTCCATGC AGGAAGGCCC GACATCGGTC
GTAGCCACGG TGAACAAGAA GCCCATCGTC ATTCGCGACT TCATTCGTGA GTATGAGCGT
CAGGTCGAAT CGCTGCGTAC CCGGTTCCCG GGTGTGACCG CGGATGAGCT CAAGAAACTG
GGGCTCAAGC GGCAGGTGCT ACAGCAGATG GTTGCCGAGA CGCTCATGCA GCAAGAGGCC
GAACGCCTTG GCATAACCGT GACGCCGTAT GAGCTGCGTG CCGCCATCGA CCAGATTCCG
GCCTTCCGCG ACGCGTCGGG CAAGTTCGAC CCCGAGACGT ACAAGAAGGT GCTCAAGGCA
CAGCAGACCG TCCCCGGTCG TTTCGAGGAA GGGGTGCGCA AAGACATGCT GGGCCGCAAG
ATGCGTGCGC TTGTCACCGC CGGTGCGGTC GTCACCGATG CCGAGGCGCG TGACATGTTC
ACCTACGCGC AGGAAAAGCG CAGCATTGAC TACGTCCTCT TCCCGCTCGA CGAATACGCT
GCGGCAGCCA GCATCGAAGA TGCCGCACTG CAGGCGTGGT ACGACAGCAA CAAGGCCCGG
TTCACCGAAC CGCAGAAGGT GCGCCTCGAT TTCGTGCGCA TCTCGGCCGA GTCGCTTGCC
GCTGGCATCG ACATCCCCGA AACGGCCATT GCGGCGTTCT ACGCCGAGAA CGCGGCGAGC
TACTTCATGC AGCCCGAACG GGTGCGTGCC CGTCACATCC TCGTGCGTGT GCCTGAAGGT
GCCGACGAGG CCACCGTACG GAAGGCCGAA GAGCGCATCG CAGACGCTGC GGCGCAGATC
AAGGCCGGAA AGGACTTCGC CGCCGTGGCG GCCAAGGTCT CCGAGGACGG CAGCGCGCGC
AACGGTGGCG AGCTTGGCTG GTTCGGTCGT GGCGAGATGG TGAAGCCCTT CGAGGACGCC
GCGTTCGGTC TCAAGCCGGG CGAGGTCTCC GCGCCGGTGC GTTCGCAGTT CGGCTTCCAT
CTCATCAAGT CCGAAGGGCA TGAGGCGCAG CGCCAGAAGG CCCTCGACGA GGTGCGCAAC
GAGATACGCA AGCGTCTGGC CGAAGAGAAG GCCATCGAGA AGGTGCACGA CTCCCTCGAC
AACGCGCTTG AACTGGTGAG CGCAGGCAAG TCGGTGGACG AGATCGCTGC ACAGCTGAAG
CTGGAGCGTC AGACCTCCGA ACCGCTGACC CGCGAAAGCG CGTCCGCCAC GCTGGGGCTC
AAGCCCGCCG ACGTCACGCT GGCCTTCTCC GCACCTGCGG GGACGGTCAT CGACACGCCC
CTCGAGGCCG AAGGCGGTTA CATCATCGCC CGTGTCGCCG AGGTCGCCCC CGAGCGCATT
CCCGGTTTCG ACGAGGTGCG TGACAAGGTC GTCGTCGCCG TGCGCGAAGA CGAAGGCGCC
AGACTGGCGC TCAAGGCCGC GGACGAGGCG CTTGCCGGGG TCAGGGACGG GCAGTTGCCC
GGTGCGCTGG CCTCGCGGGT GAAGACCTCG CCGCTCTTCG GGCGCGACGG CAACATCCCC
GGTCTGGGTG TCGACCCCGC TCTTGCCGCC GCGGCGTTCT CCGCGGAGAA GGGCGTGTGG
AGCGACAAGG CGCATGCGAC TCCGCAGGGC GTTGTCGTGC TGCGCGTGCA TGAGGTCGTG
CGGCCCACCG ACGCACAGTG GCAGGCCGTG GCCTCCACCG TGAAGGAGAC CATCCTTGCC
GCCAAGCGTG AAGAGATGTT CCGCGCCTTC CTCACCACTC TCCATGCGAA GGGCAAGGTC
GAGGTGAAGG ACGCCTCGGT GCTCGAATAG
|
|---|
| Protein sequence | MLDVIRGHAQ SWGVKVAFGL IIVVFVFWGV GSMQEGPTSV VATVNKKPIV IRDFIREYER
QVESLRTRFP GVTADELKKL GLKRQVLQQM VAETLMQQEA ERLGITVTPY ELRAAIDQIP
AFRDASGKFD PETYKKVLKA QQTVPGRFEE GVRKDMLGRK MRALVTAGAV VTDAEARDMF
TYAQEKRSID YVLFPLDEYA AAASIEDAAL QAWYDSNKAR FTEPQKVRLD FVRISAESLA
AGIDIPETAI AAFYAENAAS YFMQPERVRA RHILVRVPEG ADEATVRKAE ERIADAAAQI
KAGKDFAAVA AKVSEDGSAR NGGELGWFGR GEMVKPFEDA AFGLKPGEVS APVRSQFGFH
LIKSEGHEAQ RQKALDEVRN EIRKRLAEEK AIEKVHDSLD NALELVSAGK SVDEIAAQLK
LERQTSEPLT RESASATLGL KPADVTLAFS APAGTVIDTP LEAEGGYIIA RVAEVAPERI
PGFDEVRDKV VVAVREDEGA RLALKAADEA LAGVRDGQLP GALASRVKTS PLFGRDGNIP
GLGVDPALAA AAFSAEKGVW SDKAHATPQG VVVLRVHEVV RPTDAQWQAV ASTVKETILA
AKREEMFRAF LTTLHAKGKV EVKDASVLE
|
|---|
| |