Gene Dvul_1912 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_1912 
Symbol 
ID4664138 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp2229213 
End bp2229821 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content61% 
IMG OID639820153 
Product3'-5' exonuclease 
Protein accessionYP_967355 
Protein GI120602955 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0349] Ribonuclease D 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.254298 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.272354 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGACGA ACGTACCGGA GCGCTACAGG CGCAAGATAA GCAAGGAAGA GATCAACGAA 
CTTCCGTTGC GGCGATATGC TGGCGAGGTG CGTCTTGTGC GTACCGAAGA GGAACTCGCC
GACGCACTCG ACGTGCTGCG CAGTGACTCT GTGCTCGGCT TCGACACCGA GACGCGCCCC
ACGTTCCGCA AGGGCAAGGT CAACCTGCCT TCGCTTGTGC AACTCGCCTG TGCCGATGTC
GTGTACCTCA TCCAGTTGAA CTGGGTCCCT CTTGGCGAGA TGCTGGCAGA CCTTCTCTCC
GACCCTGCCA TCATCAAGAC CGGCGTCGCC GTCCGTGACG ACATCCGCGA CCTTCAGAAG
CTGTACGCTT TCCGTGACGG GGGCGTGGTC GACCTCGGAG AGGTGGCCCG TGACCTCGGT
CTCGAGACGC ACGGCCTGCG TAACCTCGCT GCCAATTTCC TCGGCATCCG CATATCCAAG
GGCGCACAGT GTTCCAACTG GAGCAACCGT GAGCTTGGCC CGCAGCAGGT CGTCTACGCC
GCCACCGACG CATGGGTGAG CCGCGAGATA CACATCTCGA TGCGCAATCT GGGCCTTGTG
GGGCTGTAA
 
Protein sequence
MMTNVPERYR RKISKEEINE LPLRRYAGEV RLVRTEEELA DALDVLRSDS VLGFDTETRP 
TFRKGKVNLP SLVQLACADV VYLIQLNWVP LGEMLADLLS DPAIIKTGVA VRDDIRDLQK
LYAFRDGGVV DLGEVARDLG LETHGLRNLA ANFLGIRISK GAQCSNWSNR ELGPQQVVYA
ATDAWVSREI HISMRNLGLV GL