Gene Dvul_1888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_1888 
Symbol 
ID4663002 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp2198491 
End bp2199810 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content65% 
IMG OID639820129 
ProductNADH dehydrogenase 
Protein accessionYP_967332 
Protein GI120602932 
COG category[C] Energy production and conversion 
COG ID[COG1252] NADH dehydrogenase, FAD-containing subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.635217 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAAAG CGCGTGTTGT GGTGGTCGGG GCCGGTTTCG CCGGGTTGTG GGTGGTGCGT 
CGTCTCGCGT CGGAGAAGGA TGTGGAGGTG ACGTTGCTGG ACAGGCACAA CTACCACACC
TTTCTCCCGC TGCTGTATCA GGTGGCGGCG GCGGAACTTG AGCCGGAACA GATAGCCTAT
CCCCTGCGGG GCATATGCCG CAGGCATTCC AACGTGCGGC TTGCCGTGAC GGAGGTGCGG
GACATCGACA CCGCCCGCAA GCTGGTTCGC GCCGACGGTC TGGATATTCC CTATGACTAT
CTGGTGGTGG CGGCGGGTAG CCGCACCGCC TATTTCGGGG TGCCGGGCGC AGAGGAGCAT
TCCTTCAGCC TCAAGACGCT GGAGGAGGCT GTCTGCCTTC GCAATCAGAT CATCAGTTGC
TTCGAGCAGG CAGCGCTGGA GTCCGACCCT GAACGGCGAC GGGCGATGCT GACCTTCACC
GTCGTGGGCG GCGGTCCCAC CGGGGTAGAG TACGCCGGGG CACTGGCTGA ACTTGTGCGT
GCCCCGCTGC GCAAGGATTT TCCCGAACTG GACATGAACG ATGTTCGTGT GGTGCTGCTG
GAGGCCGCAC CGGGGGTTCT GGGGGGATTT CCCGAACGGT TGAGAGGTTA TGCGAAGAAG
CGGCTGGGGG CCATGGGGGT TGAGGTGCGC CTTGATGCCA GTGTCGCCGA GGTGACGGCA
GCGGGCGTGC TGTTCGCCAG CGGCGAACAT CTGCCCACAC ATACGGTCGT CTGGACAGCG
GGCGTGCGCG GCGAAGTCGT GGCAGAGCAC ATGGGGCTGC CACTGGGGCG TGGCGGACGG
GTCGCGGTGT CGCCTACGCT TCAGGTCGAA GGGCTGCCGG AGGTGTTCGT GGTGGGCGAC
ATGTCGTTGC CGGAAGGACA GAATCCGCCC ATGAACGCCC CCAACGCCAC GCAGCAGGGG
CGTCTTGCCG CCGAGAACAT CCTCGCCATG CTTCAGCGGC GCGACCCTGT CCCGTTCCGC
TACCGCGACA AGGGGGCCAT GGCCACCATC GGGCGTCAGG CCGCTGTGGT GCGGATGGGG
AACTTCGCCT TTTCAGGATT TCTGGCGTGG CTGCTGTGGC TTTTCGTGCA CCTTGCGTAC
CTGATAGGTT TTCGCAACCG GCTCATCGTG CTCATCAACT GGGCATGGGA CTACCTGTTC
TATGAGCGGG CTGTGCGGCT CATCCTGCCA CGGCGCGGCT GCGGGACGAT AGGCAGCCGC
AAGCGGGAGG CGGCGCAGGT GCCGGACGAC ACCGACAGGC CGGGGGCGAC CTGTTCATAG
 
Protein sequence
MDKARVVVVG AGFAGLWVVR RLASEKDVEV TLLDRHNYHT FLPLLYQVAA AELEPEQIAY 
PLRGICRRHS NVRLAVTEVR DIDTARKLVR ADGLDIPYDY LVVAAGSRTA YFGVPGAEEH
SFSLKTLEEA VCLRNQIISC FEQAALESDP ERRRAMLTFT VVGGGPTGVE YAGALAELVR
APLRKDFPEL DMNDVRVVLL EAAPGVLGGF PERLRGYAKK RLGAMGVEVR LDASVAEVTA
AGVLFASGEH LPTHTVVWTA GVRGEVVAEH MGLPLGRGGR VAVSPTLQVE GLPEVFVVGD
MSLPEGQNPP MNAPNATQQG RLAAENILAM LQRRDPVPFR YRDKGAMATI GRQAAVVRMG
NFAFSGFLAW LLWLFVHLAY LIGFRNRLIV LINWAWDYLF YERAVRLILP RRGCGTIGSR
KREAAQVPDD TDRPGATCS