Gene Dvul_1858 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_1858 
Symbol 
ID4662603 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp2165750 
End bp2166979 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content63% 
IMG OID639820099 
ProductGTP cyclohydrolase II 
Protein accessionYP_967302 
Protein GI120602902 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase
[COG0807] GTP cyclohydrolase II 
TIGRFAM ID[TIGR00505] GTP cyclohydrolase II
[TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCATCT GCAAGGCCGA AGAGGCCATC GACGCCATCC GCAAGGGCGA GATGATCATC 
CTCGTCGACG ACGAGGACCG CGAAAACGAA GGCGACCTTA CCATCGCCGC GCAGCACGTC
ACGCCCGAGG TCATCAACTT CATGGCCACC CACGGGCGCG GCCTCATCTG CCTGGCCCTC
TCCCCCGAGT GGGTGGACAA GCTACAGCTG CCCCTGATGG CCCGCCGCAA CGAGTCCAAG
TTCGGCACCA ACTTCACTGT TTCCATCGAG GCGCGCCGCG GTGTCACCAC CGGCATCTCC
GCCGCCGACC GTGCCACGAC CATCCTGACC GCCGTCGCCG ACGACGTGAA GGCCGAAGAC
ATCGTCACGC CCGGTCACAT CTTCCCCCTT CGTGCCCAGA AGGGTGGGGT CATGGTCCGT
GCCGGACAGA CCGAGGGTAG CGTCGACCTC GCCAAGCTCG CCAATCTCAA GCCTGCCGCC
GTCATCTGCG AAATCATGCG CGAAGATGGC GAGATGGCGC GGATGCCCGA CCTCATCGAA
TTCGCCGAAA AGCACAACAT GAAGATCGCC ACCATCAAGG ACCTCATCCG CTACCGGATG
CAGTCGGGCC TTCTTTCGGT GAAGCGCGTG GGTGAAGCCA AGATGCCCAC CCGCTACGGC
GATTTCCAGA TCATCGCCTA CGAGAACGAA CTGCACGACG AGACCCACAT CGCCCTCGTC
AAGGGTGACA TCTCGCCCAG CGAGCCCGTG CTCGTGCGCG TGCACAGCGA ATGCCTCACC
GGTGACGTGC TGGGTTCGTT GCGTTGCGAC TGCGGCGGCC AGCTCGCCGC GGCACTGTGC
CAGATTGCGG CCAAGGGGTC GGGCGTGCTG CTGTACATGC GCCAGGAAGG ACGCGGCATC
GGCCTCGGCA ACAAGATCAA GGCCTACGGG CTTCAGGACC AAGGGTACGA CACCGTTGAG
GCCAACCACA AGCTTGGCTT CAAGGCCGAC CTGCGCGACT ATGGAATCGG TGCGCAGATT
CTGGTCGACC TCGGGGTGCG CAAGATGCGC ATGATGACCA ACAACCCCAA GAAGATCGTC
GGCCTCGAAG GCTACGGCAT AGAAGTCGTC GAACGTGTGC CCATCGAACT CGAGTCGTGC
GCCTTCAATG AAGAGTACCT GCGCACCAAG AAGGAGAAGA TGGGTCACCT GCTTGAACTG
AAGCACCACG AGAACGGAGG CGACGCCTAG
 
Protein sequence
MSICKAEEAI DAIRKGEMII LVDDEDRENE GDLTIAAQHV TPEVINFMAT HGRGLICLAL 
SPEWVDKLQL PLMARRNESK FGTNFTVSIE ARRGVTTGIS AADRATTILT AVADDVKAED
IVTPGHIFPL RAQKGGVMVR AGQTEGSVDL AKLANLKPAA VICEIMREDG EMARMPDLIE
FAEKHNMKIA TIKDLIRYRM QSGLLSVKRV GEAKMPTRYG DFQIIAYENE LHDETHIALV
KGDISPSEPV LVRVHSECLT GDVLGSLRCD CGGQLAAALC QIAAKGSGVL LYMRQEGRGI
GLGNKIKAYG LQDQGYDTVE ANHKLGFKAD LRDYGIGAQI LVDLGVRKMR MMTNNPKKIV
GLEGYGIEVV ERVPIELESC AFNEEYLRTK KEKMGHLLEL KHHENGGDA