Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dvul_1854 |
Symbol | glyA |
ID | 4662708 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris DP4 |
Kingdom | Bacteria |
Replicon accession | NC_008751 |
Strand | + |
Start bp | 2162080 |
End bp | 2163318 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639820095 |
Product | serine hydroxymethyltransferase |
Protein accession | YP_967298 |
Protein GI | 120602898 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGAGT TGCTGCTTCA GGACCCCGAG GTCGGCAAGG CCATCATTCT CGAAATCGAA CGTCAGACCG GCAAGCTTGA GCTCATCGCG TCGGAGAACT TCGTCTCCGC CGCCGTCCGG CAGGCTCAGG GCAGCGTCCT CACCCACAAG TACGCCGAAG GCTACCCCGG CAAGCGCTAC TACGGCGGAT GCGAGTTCGT CGACATCGCC GAGAACATCG CCATCGAACG CGCCCGCACC ATCTTCGGCT GCGAATACGC CAACGTGCAG CCCCATTCGG GCAGTCAGGC CAACATGGGT GTCTATTTCG CGTGCCTCAA GCCCGGCGAC ACCATCCTCG GCATGAATCT CTCGCACGGC GGCCACCTGA CGCACGGCAG CCCCGTCAAC TTTTCCGGTC GTCTCTTCAA CGTGGTGTTC TACGGTGTCG AGAAGGAGAC TGGCCGCATA GACTACGAGC AGGTGGCCGC ACTCGCACGC GAGCACAAGC CCTCCCTCAT CGTCGCCGGT GCTAGCGCCT ACCCCCGCAC CATCGACTTC GCCCGTTTCC GCGCCATCGC AGATGAAGTG GGCGCGAAGC TCATGGTCGA CATGGCCCAC ATCGCAGGTC TGGTCGCCGC TGGCTACCAC CCCAGCCCCG TGCAGCACGC CCACTACACC ACGACCACCA CGCACAAGAC GCTCCGCGGC CCGCGCGGTG GCATGATCCT CTCCACCGAG GACAACGGCA AGACGCTGAA CAGCCAGATA TTCCCCGGCA TTCAGGGCGG CCCGCTCATG CATGTCATCG CCGCCAAGGC CGTGGCCTTC GGCGAGGCGC TGCGCCCCGC GTTCAAGGAG TACCAGAAGC AGGTGGTGGA CAACGCCGCC GCCCTTGCCG GTGTGCTCAC CGCCGCCGGG TTCGATCTCG TTTCGGGCGG TACCGACAAC CACCTGATGC TGGTCGACCT CACCAGCAAG GACGTCACCG GCAAGGATGC CGAGATAGCC CTCGACAAGG CGGGCATCAC CGTCAACAAG AACACCGTCC CGTTCGAGAC CCGTTCGCCC TTCGTGACCT CCGGTGTGCG TCTCGGCACC CCGGCCCTCA CCACCCGCGG CATGAAGGCC GCCGAGATGG AGAAGGTGGG CGGATGGATC GTGGACGCCA TCGCCAACAC CACCAATGAG ACCCGACTGG CGGAGATCAG CCGCGAAGTG GAACGCTTCG CACGGCAGTT CCCCCTGTTC GCATGGTAG
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Protein sequence | MDELLLQDPE VGKAIILEIE RQTGKLELIA SENFVSAAVR QAQGSVLTHK YAEGYPGKRY YGGCEFVDIA ENIAIERART IFGCEYANVQ PHSGSQANMG VYFACLKPGD TILGMNLSHG GHLTHGSPVN FSGRLFNVVF YGVEKETGRI DYEQVAALAR EHKPSLIVAG ASAYPRTIDF ARFRAIADEV GAKLMVDMAH IAGLVAAGYH PSPVQHAHYT TTTTHKTLRG PRGGMILSTE DNGKTLNSQI FPGIQGGPLM HVIAAKAVAF GEALRPAFKE YQKQVVDNAA ALAGVLTAAG FDLVSGGTDN HLMLVDLTSK DVTGKDAEIA LDKAGITVNK NTVPFETRSP FVTSGVRLGT PALTTRGMKA AEMEKVGGWI VDAIANTTNE TRLAEISREV ERFARQFPLF AW
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