Gene Dvul_1808 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_1808 
Symbol 
ID4662507 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp2115762 
End bp2116433 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content66% 
IMG OID639820049 
ProductSua5/YciO/YrdC/YwlC family protein 
Protein accessionYP_967252 
Protein GI120602852 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0009] Putative translation factor (SUA5) 
TIGRFAM ID[TIGR00057] Sua5/YciO/YrdC/YwlC family protein 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACGCC ATATCGTCGA ATCCAATGCC GGAGCCACCA TGTCTGCCGA ACTGCTCACG 
AACATAGCCG ACGCCGTACG ACTTCTCGCG GGAGGCGGTG TCCTTGTCTA CCCCACCGAG
ACGTTCTTCG GCATCGGGTG CGATGTGCGA GATGCGCGAG CGGTCGATGC CGTGTTCCGG
GCGAAGCGGA GGCAGTCCGG GATGGCATTG CCCGTCATCC TCGGCGATGC CAGCCAGCTG
GGCATGGTCA CCCGAGGTCA TGGCGCTGTC GAGGCTGCCC TTGCCCGCGA TTTCTGGCCC
GGCCCGCTTT CGATACTCTG TCCGGCGCTG CCGGAGTTGC CCGACACCTT GACAGGGGGA
ACGGGCCGCG TGGCGGTGCG TGTGTCGCCC CATCCTGCGG CCATGGCTCT CGCATTGGGC
CTTGGCGCGC CTCTTGCCGC ATCCAGTGCC AATGTCAGTG GCAGGGCGGC CGTGGTGCGT
GTCGCCGACC TCGACCGTGA GCTTCTTTCT GGCGTCGACG GTGTGTATGA TGCCCCGCCG
CAGCCTGCCG GGGGATTGCC CTCGACGCTG GTCGATGTCC TGACCGACGG GACGCTCCGA
ATCCTGAGGG AAGGAGCGGT GCCGAGAGCG GCACTTGTCA GCAAAGGCTA CGAGGTGGTC
TCGCCCTGCT GA
 
Protein sequence
MQRHIVESNA GATMSAELLT NIADAVRLLA GGGVLVYPTE TFFGIGCDVR DARAVDAVFR 
AKRRQSGMAL PVILGDASQL GMVTRGHGAV EAALARDFWP GPLSILCPAL PELPDTLTGG
TGRVAVRVSP HPAAMALALG LGAPLAASSA NVSGRAAVVR VADLDRELLS GVDGVYDAPP
QPAGGLPSTL VDVLTDGTLR ILREGAVPRA ALVSKGYEVV SPC