| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_1768 |
|---|
| Symbol | |
|---|
| ID | 4662868 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris DP4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008751 |
|---|
| Strand | - |
|---|
| Start bp | 2065061 |
|---|
| End bp | 2067136 |
|---|
| Gene Length | 2076 bp |
|---|
| Protein Length | 691 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 639820008 |
|---|
| Product | elongation factor G |
|---|
| Protein accession | YP_967212 |
|---|
| Protein GI | 120602812 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0480] Translation elongation factors (GTPases) |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00484] translation elongation factor EF-G |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000685465 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.842753 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCACGAG TAGTTCCTAT CGATATGCAG CGGAACATCG GTATCATGGC CCACATTGAC
GCGGGCAAGA CCACGACTAC CGAGCGTATC CTCTTCTACA CGGGCGTTTC CCATAAGATC
GGCGAAGTCC ATGACGGCGC AGCCACCATG GACTGGATGG AGCAGGAGCA GGAGCGTGGT
ATCACCATCA CTTCTGCTGC TACTACCTGT TTCTGGCGTG AACACCGTGT CAACATCATC
GACACCCCCG GCCACGTCGA CTTCACCATC GAAGTCGAAC GTTCCTTGCG TGTCCTTGAC
GGCGCGGTCT GCGTATTCGA CGCCGTTGCC GGTGTCGAAC CCCAGTCCGA GACGGTGTGG
CGTCAGGCAG ACCGTTATGG CGTTCCGCGC ATCTGCTTTG TCAACAAGAT GGACCGTATC
GGGGCCAGCT TCGAGCGTTG CGTCGGCATG ATCCGTGACC GTCTTCGCGC GAAGCCGATT
CCGGTTCAGC TTCCCATCGG TGCCGAAGAC CGCTTCGAAG GCGTCATCGA CCTCATCACC
GGCAAGGCTG TGACTTTCGA CAAGGCGTCG AAGGGGCAGA CCTTCAACGT GGGGGATGTG
CCTGCCGAGT ACCGCGATCA GTACGACGCC ATGCGCTTTG AGATGATCGA AGCCGTAGCT
GAGGAAGATG AAGCGCTCAT GGAGAAGTAT CTCGGTGGTG AAGAACTCAC TGTCGAAGAA
ATCATCTCCT GCGTACGCAA GGCCACCATT GCCCGTAACA TCGTTCCGGT GCTGTGCGGT
TCCGCCTTCC GCAACATGGG TGTGCAGCCT CTTCTCGACG CTGTCGTCGA CTTCCTGCCT
TCGCCTGTCG ACATCGAACA GATGAAGGGT GTGAATCCGG ACAAGGAAGA AGAGACCATC
GTCTGCCCCT GCGACGACAA GGAACCTCTC GCTGCCCTCG TCTTCAAGCT CTTCTCCGAC
CCGTATATCG GGCACCTCTC GTTCTGCCGC ATCTATTCTG GCTTCATCGA GTCAGGCATG
ACGGTTCTGA ACGCGAACAC CGGCAAGCGC GAGCGTGTCG GTCGCCTGCT GAAGATGCAC
GCCAACAAGC GTGAAGAAAT CAAGTGGGCG GGTGCTGGTG ATATCGTGGC CCTTGTTGGC
CTCAAGCTGG CTTCGACCGG TGACACCATC TGCGATGAAA AGCGCCCTGT GGTGCTCGAA
TCGCTGGATA TTCCGGAGCC GGTCATCGAG GTTGCCATCG AGCCCAAGAC CAAGGCTGAC
CGAGACGCCC TTTCCGCCGC GCTCGCCAAG CTTGCCAAGG AAGACCCGTC CTTCCGCGTG
AAGGGCGACG ACGAGACCAA CCAGACCCTG ATCGCCGGTA TGGGCGAACT CCATCTGGAA
ATCATCGTCG ACCGTCTTAC CCGCGAGTTC AGCGTCAACG CCAACGTGGG CAAGCCTCAG
GTCGCCTACC GTGAGACCAT CACCAAGCCC GGCAAGGCTG ACACGAAGCA TGTCAAGCAG
TCTGGTGGTC GTGGTCAGTA CGGTCATGCC GTCATCGAGA TCGAACCGAA CCCCGGCAAG
GGGTACGAGT TCGTGAACAG CATCACCGGT GGTGTCATTC CCAAGGAATA CATCGCCCCC
ATCGACAAGG GTATCCAGGA TGCGCTCAAG AGCGGTATCC TTTCTGGCTT CCCCACTGTC
GACATCAAGG TCAATCTTGT CTTCGGTTCG TACCACGACG TCGACTCTTC GGAGCAGGCG
TTCTACGTGA CCGGTTCGAT GGCTATCAAG GAAGCCATCG CCAAGAGTGG CCCGGTTCTG
CTTGAGCCCA TCATGGACGT CGAAGTCGTC ACCCCTGACG AGTACCTCGG CGATGTCATG
GGCGACCTGA ACGGTCGTCG TGGCAAGGTG CAGAGCATGG AAGCGCGCGT AGGTGCGCAG
TCCATCCGTG CTCAGGTCCC CCTGAGCGAG ATGTTCGGCT ACGCGACAGA CCTGCGTTCG
AAGACGCAGG GCCGTGCGAC CTTCTCTATG CAGTTCCATC ATTACGAGCG AGTGCCTGCG
GCTCTCGCCG AGGAACTTGT AAAGAAGAAG GGCTAG
|
|---|
| Protein sequence | MARVVPIDMQ RNIGIMAHID AGKTTTTERI LFYTGVSHKI GEVHDGAATM DWMEQEQERG
ITITSAATTC FWREHRVNII DTPGHVDFTI EVERSLRVLD GAVCVFDAVA GVEPQSETVW
RQADRYGVPR ICFVNKMDRI GASFERCVGM IRDRLRAKPI PVQLPIGAED RFEGVIDLIT
GKAVTFDKAS KGQTFNVGDV PAEYRDQYDA MRFEMIEAVA EEDEALMEKY LGGEELTVEE
IISCVRKATI ARNIVPVLCG SAFRNMGVQP LLDAVVDFLP SPVDIEQMKG VNPDKEEETI
VCPCDDKEPL AALVFKLFSD PYIGHLSFCR IYSGFIESGM TVLNANTGKR ERVGRLLKMH
ANKREEIKWA GAGDIVALVG LKLASTGDTI CDEKRPVVLE SLDIPEPVIE VAIEPKTKAD
RDALSAALAK LAKEDPSFRV KGDDETNQTL IAGMGELHLE IIVDRLTREF SVNANVGKPQ
VAYRETITKP GKADTKHVKQ SGGRGQYGHA VIEIEPNPGK GYEFVNSITG GVIPKEYIAP
IDKGIQDALK SGILSGFPTV DIKVNLVFGS YHDVDSSEQA FYVTGSMAIK EAIAKSGPVL
LEPIMDVEVV TPDEYLGDVM GDLNGRRGKV QSMEARVGAQ SIRAQVPLSE MFGYATDLRS
KTQGRATFSM QFHHYERVPA ALAEELVKKK G
|
|---|
| |