Gene Dvul_1753 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_1753 
SymbolrplE 
ID4662891 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp2058248 
End bp2058787 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content55% 
IMG OID639819993 
Product50S ribosomal protein L5 
Protein accessionYP_967197 
Protein GI120602797 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0094] Ribosomal protein L5 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.182239 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.617775 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCGTC TTGAAAATAT CTACCGCGAG AAAGTGGTTC CGGTATTGCA AAAGGAGTTC 
AACTACGACT CCTCGATGCA GGTTCCCGGG ATTGTAAAAG TCTCTCTCAA CATCGGTCTC
GGTGCTGCGA GCCAGAACAA CAAATTGATG GAAGAAGCCC TCAAGGAGTT GACTGTCATC
GCCGGTCAGA AGGCCGTCGT CACCCGTGCC AAGAAGTCCA TCGCGTCGTT CAAGCTTCGC
GAAGGCATGC CCATCGGCTG CCGTGTGACC TTGCGCAAGG AACGTATGTG GGACTTCCTG
GACAAACTGA TCAACTTCGC GCTTCCGCGC GTGCGTGACT TCAGAGGCGT TCCGGATCGT
GGTTTCGACG GCCGTGGCAA TTTCACGCTC GGCATCAAGG AACATGCGAT TTTCCCGGAA
ATGGAAGCCG ATAGGGTTGA GAATCCCAAG GGGATGAACA TCACCATCGT CACCACCGCC
ACGACCGACA AGGAAGGCAA GCTCCTGCTC GACCAGCTGG GCATGCCTTT CAGAAAGTAA
 
Protein sequence
MTRLENIYRE KVVPVLQKEF NYDSSMQVPG IVKVSLNIGL GAASQNNKLM EEALKELTVI 
AGQKAVVTRA KKSIASFKLR EGMPIGCRVT LRKERMWDFL DKLINFALPR VRDFRGVPDR
GFDGRGNFTL GIKEHAIFPE MEADRVENPK GMNITIVTTA TTDKEGKLLL DQLGMPFRK