Gene Dvul_1719 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_1719 
Symbol 
ID4663302 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp2030073 
End bp2030972 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content65% 
IMG OID639819958 
Productpolyprenyl synthetase 
Protein accessionYP_967163 
Protein GI120602763 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0142] Geranylgeranyl pyrophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.130705 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACGA CCGCTGACCT CAAGGCCCGT CTGCGGATGC AGGCGGCGCG CGTCGAAGGC 
TACCTTGCCA CTTGCCTTGC AGGGCGGGGT ATTCCCCCTC GTCTGCAAAG TGCCATGGAA
TACAGCCTTC TAGCGGGTGG CAAACGCCTT CGGCCTGTGC TCTGCCTCTC GACGGCTGGC
ATGACCGGGC TCGACCCCAT GTCGGTGATG CCGTTCGCTG CAGCCATCGA GCTCATCCAC
ACCTATTCGC TCATCCATGA CGACCTGCCT GCCATGGACG ATGACGACCT GCGCAGAGGT
CGTCCCTCCA ACCATCGCCA GTTCGATGAG GCGACCGCCA TCCTCGCTGG TGACGGCCTG
CTGACCGATG CCTTCGACCT CATGGCTTCG GTGGGCGGGG GCATCCCCGC AGGGCACGTG
CTCGCCGCCT TGCGCGAAGT GTCGTCTGCC GCAGGGTCGT CCGGCATGGT TGGCGGGCAG
GCTCTCGACA TGGACTATAC CGGTCGGGAT GACATCGACC TAGCCGCCTT GCGTACCATG
CACGCCATGA AGACCGGGGC TCTCATCCGC TGTTCGTGCG TCGCGGGTGC GCTGCTCGGT
GGTGCACCGG CTTCCGCCGT AGAGCAGGTC GCGGGGTATG GTGCCGCCAT CGGCGCGGCG
TTTCAGATCG TCGACGACAT CCTCGACGAG ACGGGCGACG AGGCGCAACT CGGCAAGCCC
GTGGGCAGCG ACGTGGAGCA GGGCAAGGTG ACCTATCCTT CGTTGCTCGG CATCGAACGC
AGCCGGGCCC TGGCGCAGGA ACAGGCAGAC ATTGCCGTGA CGTGTCTCGC AGATTTCGAG
GGCGAGGATG CAGACTTCCT TCGCGCCCTC GCCCAGTATA TTGTTGATCG CGTCTCTTGA
 
Protein sequence
MATTADLKAR LRMQAARVEG YLATCLAGRG IPPRLQSAME YSLLAGGKRL RPVLCLSTAG 
MTGLDPMSVM PFAAAIELIH TYSLIHDDLP AMDDDDLRRG RPSNHRQFDE ATAILAGDGL
LTDAFDLMAS VGGGIPAGHV LAALREVSSA AGSSGMVGGQ ALDMDYTGRD DIDLAALRTM
HAMKTGALIR CSCVAGALLG GAPASAVEQV AGYGAAIGAA FQIVDDILDE TGDEAQLGKP
VGSDVEQGKV TYPSLLGIER SRALAQEQAD IAVTCLADFE GEDADFLRAL AQYIVDRVS