| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_1718 |
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| Symbol | |
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| ID | 4663316 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris DP4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008751 |
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| Strand | - |
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| Start bp | 2028108 |
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| End bp | 2030033 |
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| Gene Length | 1926 bp |
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| Protein Length | 641 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639819957 |
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| Product | 1-deoxy-D-xylulose-5-phosphate synthase |
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| Protein accession | YP_967162 |
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| Protein GI | 120602762 |
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| COG category | [H] Coenzyme transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG1154] Deoxyxylulose-5-phosphate synthase |
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| TIGRFAM ID | [TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0789997 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.8348 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGATA GCACCATTCC AGGCCTTCTG GCGCGCATCC AGCGCCCTAC CGACGTTGCG
GGCCTCTCCG CAGATGACCT GCGTACCCTC GCGGCCGACC TGCGCACCGC CATCATCGAT
ACGGTTTCCA AGAACGGCGG GCATCTCGCC CCCTCACTCG GCGTTGTGGA ACTCACGCTG
GCGATGCTCT CCACATTCGA CCCCGGCAAG GACAAGGTCG TCTGGGACGT GGGGCATCAG
GCCTACGCAT GGAAGCTTCT CACGGGCCGG GCGGCCGATT TCCACACCCT GCGCCGCAGG
CATGGCATCA GCGGCTTCCC CAAGCCGTGC GAGAGCGAGT ACGACCATTT CGGCGTGGGG
CACTCCTCCA CGTCCATCTC GGCGGCACTG GGCATGGCCT TGGCGCGTGA CCTCGCCGGG
GATGATCATC ATGTGGTGGC CGTCATCGGT GACGGTTCGC TCACGGCCGG GCTGGCCTTC
GAGGGGCTGA ATCAGGCTGG TGACATGGGC AGGCGGCTCA TCGTCATCCT CAATGACAAC
GAGATGTCCA TCTCGAGGAA CGTGGGGGCG CTCTCGCTGT TCCTCAGCCG CAACCTGTCC
AAGGGGTGGG CGCGTCGCGT CAAACGCGAT GTGGAGACGG CCCTCAAGTC CATTCCCGGC
ATCGGCGACG AGATGGTCGC CTACGCCAAG CGCAGCGAAC ACAGCCTGAA GAGTTTCTTC
ACCCCGGGGA TGCTGTTCGA GGCGTTCCAG TTCAACTACA TCGGGCCTGT GGACGGGCAC
GATGTGAAGG CGCTGGTCCG TAACCTCGAA CTGGCGAAGA CCAACGACAG GCCCGTGCTG
CTGCATGTGC TCACCCGCAA GGGAAAGGGC TATACCCCGG CCGAGGCCAA CCCTGCGTTC
TTCCACGGTG TGGGCCGCTT CGAACCGGAG ACGGGCAGGG CACGCAAGCC CGGCGACACC
CCCGTGCTGC CCACCTATAC CGATGTGTTC GGCGAGACGC TGTGCCGTCT TGCCGACATG
GATGAGCGTA TCGTTGCCAT CACGGCAGCC ATGCCGGAAG GGACGGGTAC GAACTGTTTT
CGCGAGCGGC ATCCCGACAG GTTCGTGGAT GTGGGCATCT GTGAACAGCA CGCTGTCACC
TTCGCCGCCG GTCTCGCCAT TCAGGGGTAT CGCCCCTTCG TCGCCATCTA TTCCACGTTC
CTGCAACGTT CCTACGACCA GATAGTGCAC GACGTGTGCA TCCAGAAACT GCCCGTGGTG
CTGTGCCTCG ACCGCGCCGG ACTGGTGGGC GAGGACGGGC CGACCCATCA TGGGGCCTTC
GACCTGTCGT TCCTGCGCCA CATCCCGCAC ATGAGCATCA TCGCCCCGCG TGACGAGGCC
GACCTTCAGG CTGCCATGTA CACGGCGCTG CATCTCGATG CCCCGCTGGC GATACGGTAT
CCGCGCGGCG TGGGCTTCGG CATTCCGCTG GCGGAGTCAC CATCGCCACT GCCCGTGGGC
GTCGGTGAAG TGCTCAAGGA AGGCGAAGGG GTGGCTGTCA TCGCCGTCGG CAGTCGCGTC
CATCCGTCCC TCGAAGCAGC CGAAAGGCTG GCGGAGGAGA CGGGCAGACA CGCCACCGTC
TTCGACGCCC GATGGGTGAA ACCCTTGCCG GAGGCGCAGC TTCTGGACAT CGTCGCCCGC
CATGACGCCT TGCTCTTCGT GGAGGAGAAT GCCCTCGCCG GTGGCTTCTC GTCAGCCGTC
CTCGAACTGC TGGCAGACCG GAACGCCCTT TCAGGCAAGC ATATCCGTCG CATCGGGTTG
CCCGACGAAT TCGTCGAACA GGGTACGCAG AAGGAACTGC GGGTCTCTCT GGGCCTCTGT
ATGGACGGCG TCGGAAAGGC CCTGAAAGAG CTTTTCGCCG CCGTGGGGAA CGCGACCGCT
TCATAG
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| Protein sequence | MTDSTIPGLL ARIQRPTDVA GLSADDLRTL AADLRTAIID TVSKNGGHLA PSLGVVELTL
AMLSTFDPGK DKVVWDVGHQ AYAWKLLTGR AADFHTLRRR HGISGFPKPC ESEYDHFGVG
HSSTSISAAL GMALARDLAG DDHHVVAVIG DGSLTAGLAF EGLNQAGDMG RRLIVILNDN
EMSISRNVGA LSLFLSRNLS KGWARRVKRD VETALKSIPG IGDEMVAYAK RSEHSLKSFF
TPGMLFEAFQ FNYIGPVDGH DVKALVRNLE LAKTNDRPVL LHVLTRKGKG YTPAEANPAF
FHGVGRFEPE TGRARKPGDT PVLPTYTDVF GETLCRLADM DERIVAITAA MPEGTGTNCF
RERHPDRFVD VGICEQHAVT FAAGLAIQGY RPFVAIYSTF LQRSYDQIVH DVCIQKLPVV
LCLDRAGLVG EDGPTHHGAF DLSFLRHIPH MSIIAPRDEA DLQAAMYTAL HLDAPLAIRY
PRGVGFGIPL AESPSPLPVG VGEVLKEGEG VAVIAVGSRV HPSLEAAERL AEETGRHATV
FDARWVKPLP EAQLLDIVAR HDALLFVEEN ALAGGFSSAV LELLADRNAL SGKHIRRIGL
PDEFVEQGTQ KELRVSLGLC MDGVGKALKE LFAAVGNATA S
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