| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_1705 |
|---|
| Symbol | |
|---|
| ID | 4663382 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris DP4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008751 |
|---|
| Strand | + |
|---|
| Start bp | 2014725 |
|---|
| End bp | 2015600 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639819944 |
|---|
| Product | dTDP-4-dehydrorhamnose reductase |
|---|
| Protein accession | YP_967149 |
|---|
| Protein GI | 120602749 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1091] dTDP-4-dehydrorhamnose reductase |
|---|
| TIGRFAM ID | [TIGR01214] dTDP-4-dehydrorhamnose reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00204085 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.651239 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCGC GGCCGCGTGC GGTCGTACTG GGGGGACGCA CCGGGCTTCT GGGGCAGTCC
CTCGTGCTTG CGTTGCGAAA CGGCGGCTGG GATGCCGTGC CCGTCGGACG CGACGATGTC
GACGTCCTTG ACGCAGAACG CCTGGCCGAC TTCATCGACA AGGCTTCGCC ACAAGCGGTC
TTCAACACCG TGGCGTGGAC GCAGGTCGAC CTTGCAGAAG AGCATGAGCA GGAAGCCGCC
CAACTGAACC GGGCGCTGCC CGCCTCGCTT GGACGCATCG TTCGTGGTAC CGGCATGCAC
CTTGTGCATC TGAGCACCGA CTTCGTGTTC AACGGACGCA AGACGACGCC CTACACCACC
GACGACACCC CCGACCCGGC TTCAGTCTAC GGGACGACCA AACTGGCTGG CGAAACCGCC
CTCCTGTCCA TCGCCCCCGA CAACTGCTGC GTCGTCCGCA CCGCATGGCT GTTCGGTCCC
GGCAGACGCA ACTTCGTTCA GACCATTCTG GGACTGTGCG CCGCCAAGGA CGACATACAG
GTGGTGCACG ACCAGACGGG GTCGCCGACC TACACGGTGG ACCTTGCCGC CGGTTGTGTA
CGCCTTGCCG AATTGCGGGC AACGGGTCTT TTCCATGTGG TCAACGCAGG GCAGGCAAGC
TGGTGCGAAC TGGCCTCCGA AGCCGTGCAT CTGGCGGGCC TGCACTGCAA GGTGCACGCC
ATCACTTCCA AGGACTGGCC TCAGAAGGCC GCCCGCCCTG CCTACTCCGT ACTCGACACG
TCACGTTTCA CAGAAGTCAC CGGCATCGTC CCCCGCCCAT GGCCACAGGC CTTGCGGGAC
TACATCTACA AGGATTGCAT CCCCTCCGGG AACTGA
|
|---|
| Protein sequence | MTARPRAVVL GGRTGLLGQS LVLALRNGGW DAVPVGRDDV DVLDAERLAD FIDKASPQAV
FNTVAWTQVD LAEEHEQEAA QLNRALPASL GRIVRGTGMH LVHLSTDFVF NGRKTTPYTT
DDTPDPASVY GTTKLAGETA LLSIAPDNCC VVRTAWLFGP GRRNFVQTIL GLCAAKDDIQ
VVHDQTGSPT YTVDLAAGCV RLAELRATGL FHVVNAGQAS WCELASEAVH LAGLHCKVHA
ITSKDWPQKA ARPAYSVLDT SRFTEVTGIV PRPWPQALRD YIYKDCIPSG N
|
|---|
| |