Gene Dvul_1679 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_1679 
Symbol 
ID4663745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp1992511 
End bp1993143 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content60% 
IMG OID639819918 
ProductNLP/P60 protein 
Protein accessionYP_967123 
Protein GI120602723 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGGCAGC CGACATCGAG CAATTCCCCC GAAAAGGCGG TGTCTGCCTC TGCATCCCTA 
GCCGATGCTG ACGATGCCGG TGATGCCTCC ATCTTCGATG CTGCGGCAGA AGAGGACGCC
ACGCTCGCCG ATGATGTCCT CGCGGATATC GCCGAGCTGG ATGAGCTTCT CGCCGAGGGG
ACAGAAGACG AGAGCGACCT CATCGCCGGA GGCATGAGCC CCGTACCGGC CAACCAGATG
GAGTTCGGCG ACGGAAACGC CGCCTACAGG CTTGTGAATC TGGCCCTCAG CCAACTGGGA
ACACGCTACA GAAGGGGCGG AACCGAACCC CGGACGGGCT TCGACTGCTC CGGGTTCACC
TCATGGGTGT ACAGCACGAT GGGGATCGAT CTCCCCAGAA GTTCACAGAG CCAGTATCTT
GAAGGGCGCA AGATCAACAA GTCTCAGTTG CAGACAGGTG ATCTTGTATT CTTCCAGCGC
AAGAAGCGCA GAATATCGCA TGTGGGCATC TACCTCGAAG ACGGCAAGTT CATCCACAGC
AGTTCCCCCG GCGACACCGT CAAGATTTCC CGGCTTGACG AGCCAGTGTG GCAACGTCAG
TGGGCGGGGG CGCGTCGGGT GATACGTTAC TAG
 
Protein sequence
MRQPTSSNSP EKAVSASASL ADADDAGDAS IFDAAAEEDA TLADDVLADI AELDELLAEG 
TEDESDLIAG GMSPVPANQM EFGDGNAAYR LVNLALSQLG TRYRRGGTEP RTGFDCSGFT
SWVYSTMGID LPRSSQSQYL EGRKINKSQL QTGDLVFFQR KKRRISHVGI YLEDGKFIHS
SSPGDTVKIS RLDEPVWQRQ WAGARRVIRY