Gene Dvul_1626 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_1626 
Symbol 
ID4664247 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp1926520 
End bp1928241 
Gene Length1722 bp 
Protein Length573 aa 
Translation table11 
GC content61% 
IMG OID639819865 
ProductAMP-dependent synthetase and ligase 
Protein accessionYP_967070 
Protein GI120602670 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCACG ATACCGCCAC CCGCGAAATG CCCTGGCTGC AAAGCTACGA CAAGGATGTT 
CCGGCCCGCA TCGACTACGA GGTCGCCCCC CTCTTCGCCT TCCTCGACGA AGCGGCGGAA
AGGCACCCGA AGCAGACCGC CATCATCTTC CGCAACTACA AGGTCTCCTA CGCGAAACTG
CGCCTGCTCG CAGAGCGCTT CGCCGCCAAC CTGAGGGCAC AGGGCGTATT GCCGGGGGAC
AGGGTCTCGG TCATGCTTCC CAACGTCCCG CAGGCCATCA TCGCCTTCTG GGGACTGCTC
AAGGCCGGTT GCACCGTGGT GATGACCAAC CCGCTCTATA TGGAAAAGGA GCTGGTGCAC
CAGATTCACG ACTCCGGCGC GGAATACATG ATCGCCCTCG ACCTCGTCTG GCCCAAGATA
GAGCCCCTGC GCGACAGGCT GGGCATCCGC AAGTTCTTCA TCACCCGCAT CAGCGACGCC
CTCGGGTTCC CGCTGAACCT GCTCTACCGT TTCAAGGCCA AACGGGAGGG GACATGGCGT
GACGTACCCT TCGACGGGGA GACCGTCATC CCGTGGAAGA CCCTGTTCAA GAAGAAGGAA
GGCTACTCCG CCAAGGTGGA GAACCCGCGT GAAGCCCTCG CCCTGCTCCA GTACACCGGG
GGCACCACGG GCATATCGAA AGGTGTCATG CTCACGCACT ACAACCTTTC GGTGAACGTA
CAGCAGATCA AGGCCATCCT TGGTGAAAGC ACCCGGATGC GCCACACCTT CCTTGGCCTC
ATGCCCTACT TCCATGTCTA CGGGCTGACC ACCTGCCTGA CGCTGCCAAC CGCACTCGGC
GCGACCATCA TCCCCTTCCC GCGCTATGTG CCGCGCGACG TGCTGGTTGG TATCGACAAG
CACAAGCCCA CGATCTTTCC GGGTGCGCCC TCCATCTACA TCTCGCTCAT GCAGCAGAAG
GACGTCGGAG AATTCGACCT CAAATCCATC AAGTACTGCA TCTCCGGTTC CGCCCCCATG
CCACTGGAGC ACATCCGCCG CTTCCATGAA CTGACGGGCG CACAGGTCAT CGAAGGCTTC
GGCCTCACAG AGGCTTCTCC GGTCACGCAC CTCAACCCCA TCCACGGCGT CCAGAAACCC
GGTTCCATCG GCGTGCCCTT TCCGGACACG GAGGCACGGG TCGTCGACAT GGAGGTGGGT
CTCGTGCCCC TGCCCCCCGG CAAGATAGGC GAACTCATCA TTCGCGGCCC GCAGGTCATG
CAGGGCTACC TCAACCGCCC TGACGAGACG GCCAACACCC TGCGCAACGG CTGGTTGTAC
ACCGGCGACA TCGCCACCAT GGATGAAGAC GGCTACTTCT TCATCGTCGA CCGCAAGAAG
GACATGATCA TCGTGGGTGG CTACAACGTC TACCCGCGTG AAATCGATGA AGTCCTTCAC
GAGCACCCAA AGGTGAAGGA AGCGGTCACG GTGGGCGTTC CGCACGCCAC CCGGGGCGAG
ATCATCAAGG CCTACATCGT GCCGCGCGAG GGTGTGAAGC TCACCAAGGC CGAGATAGTG
GCCCACTGCC GAGAACAACT GGCCAATTAC AAGGTGCCCA AGCAGGTCGA ATTCCGTAAC
GAGTTGCCCA AGACCATCGT GGGCAAGGTG TTGCGTCGCA TCCTGCGTGC CGAAGAAGAA
GAGCGTCTCA AGAACGCTCC TGCCGGAAAC GGGGAGGACT AG
 
Protein sequence
MMHDTATREM PWLQSYDKDV PARIDYEVAP LFAFLDEAAE RHPKQTAIIF RNYKVSYAKL 
RLLAERFAAN LRAQGVLPGD RVSVMLPNVP QAIIAFWGLL KAGCTVVMTN PLYMEKELVH
QIHDSGAEYM IALDLVWPKI EPLRDRLGIR KFFITRISDA LGFPLNLLYR FKAKREGTWR
DVPFDGETVI PWKTLFKKKE GYSAKVENPR EALALLQYTG GTTGISKGVM LTHYNLSVNV
QQIKAILGES TRMRHTFLGL MPYFHVYGLT TCLTLPTALG ATIIPFPRYV PRDVLVGIDK
HKPTIFPGAP SIYISLMQQK DVGEFDLKSI KYCISGSAPM PLEHIRRFHE LTGAQVIEGF
GLTEASPVTH LNPIHGVQKP GSIGVPFPDT EARVVDMEVG LVPLPPGKIG ELIIRGPQVM
QGYLNRPDET ANTLRNGWLY TGDIATMDED GYFFIVDRKK DMIIVGGYNV YPREIDEVLH
EHPKVKEAVT VGVPHATRGE IIKAYIVPRE GVKLTKAEIV AHCREQLANY KVPKQVEFRN
ELPKTIVGKV LRRILRAEEE ERLKNAPAGN GED