| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_1625 |
|---|
| Symbol | |
|---|
| ID | 4664257 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris DP4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008751 |
|---|
| Strand | + |
|---|
| Start bp | 1925202 |
|---|
| End bp | 1926389 |
|---|
| Gene Length | 1188 bp |
|---|
| Protein Length | 395 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639819864 |
|---|
| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
|---|
| Protein accession | YP_967069 |
|---|
| Protein GI | 120602669 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
[COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
|---|
| TIGRFAM ID | [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
[TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.994833 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTACTT GGGTACTACT GCTCGCAGCA GGAAGCGGCA CACGACTCGC CACAGCGGGA
CTGCCCGATG CCAAACAGTT CCTTCCCCTG CATGGAGCGC CCCTGTACTG GGCCTCGGCC
CGCACCATGG CGCATGTCGC CGGTATAGAG GGCATCGTCT TCGTATTCCC CCCCCACCGG
GTCGAGGAAG AGCGTGCGCG TATCTCGGCA CTCGATGATG GCAGCGTGCT TGGACTCGAC
TGGCATGTGG TGGGCGGCGG CGCAGCCCGA CAGGACTCCG TGGCCTGCGG CCTTGCAGCG
CTTCCGCGTT CCTGCGAGGC CGTCCTCGTC CACGATGCCG CACGCCCCTT CGCTTCACCC
GCCCTTGTCG CCCGTGTACT CTCCGCGTTG CATGACGGAC ACGCCGGTGT CGTTCCGGGC
ATCCCCCTCA CCGACACGGT GAAGGAGACC ACCGACGGCT TCGTAGCGAA CACGCCCGAC
AGGTCGAGAC TCGTTGCCGT GCAGACCCCA CAGGGTTTCA CGCTGAAAGC ACTTTCCACC
GCGCACGAGA CGGCCCGCAC GGCAGGCTGG AACGTCACCG ATGACGCGGC CCTGCTTGAA
CGGTGCGGCA TTCCCGTGCG CATCGTCGCA GGCGAAGTCG TCAACGCCAA GATTACCACC
CCGGAGGACC TCGCCATGCT CGATGCAAAT GAGCCTCAAG TCACCGTGCC GTGCGTAGGG
TGGGGCTACG ATGTCCATCG CTACGGCGAG GGGCGCCCCA TGAAGCTTGG CGGCGTCCTT
ATCCCGGAAG GGCCCGAGGT CGTGGCCCAC TCCGACGGTG ATGTCCTGCT GCATGCGCTT
GCCGACGCCC TTCTCGGCTG CATCGGCGCA GGTGACATAG GGCTGCACTT TCCCGACAGC
GACGCCGCGT TCGACAACGC CAACTCCGCC ATGCTTCTCG ACAGGGTGTT GCACATGACC
CACGAGGCAC GGTTGCGTCT CACCCACGTA GACCTCACCA TCGTGGCCCA GGTTCCGAAG
CTGTCCCCGT GGCGCGACAA GATTCGCGCC AATGTCGCAA GGCTGCTCGA TTTGCCTGTC
ACCAGTGTCA ACTTCAAGGC TACCACGGAA GAGGGTCTCG GCTTCACAGG TGAGAAGAGG
GGCATCAAGG CCATCGCCGC CGTCACCGGT CTGAGACCGA TGCCGTAG
|
|---|
| Protein sequence | MRTWVLLLAA GSGTRLATAG LPDAKQFLPL HGAPLYWASA RTMAHVAGIE GIVFVFPPHR
VEEERARISA LDDGSVLGLD WHVVGGGAAR QDSVACGLAA LPRSCEAVLV HDAARPFASP
ALVARVLSAL HDGHAGVVPG IPLTDTVKET TDGFVANTPD RSRLVAVQTP QGFTLKALST
AHETARTAGW NVTDDAALLE RCGIPVRIVA GEVVNAKITT PEDLAMLDAN EPQVTVPCVG
WGYDVHRYGE GRPMKLGGVL IPEGPEVVAH SDGDVLLHAL ADALLGCIGA GDIGLHFPDS
DAAFDNANSA MLLDRVLHMT HEARLRLTHV DLTIVAQVPK LSPWRDKIRA NVARLLDLPV
TSVNFKATTE EGLGFTGEKR GIKAIAAVTG LRPMP
|
|---|
| |