Gene Dvul_1607 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_1607 
Symbol 
ID4664996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp1904432 
End bp1906879 
Gene Length2448 bp 
Protein Length815 aa 
Translation table11 
GC content61% 
IMG OID639819845 
Productpeptidase S16, lon domain-containing protein 
Protein accessionYP_967051 
Protein GI120602651 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1067] Predicted ATP-dependent protease 
TIGRFAM ID[TIGR00764] lon-related putative ATP-dependent protease 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATAC CCGGTGCCAT TTCCCCATTG GCTGTCGAAC AGCTGCGCTG GACTGTAGAC 
CCTTCTTCCC TTCCCTTTTC GACCACGTCC GACTTGTCAG CCCATGACGG CATCATCGGT
CAGCGCCGCG GCGTAGAGGC GTTCCGCTTC GGTATGGGGA TGGACGGGCG TGGGTACAAC
ATCTTCGTCA CCGGCGCCTC GGGCATAGGC AAGCTCGCCA TGACCCGCCA GTTGCTGCAA
CAGGCGGGGG GGGGCGTCGT GCCGGACGAC CTCTGCTACG TCAACAACTT CACCGTGCCC
GAAGAACCCG TGTTGCTGCG TTTCCCCGCC GGGCGGGGCA AGCGGTTCAA GGCTGATGTG
CAGGCGTTTC TCGACACCAT CAAGCGCGAC ATCCCGCAAC TTTTCGAGAG TCAGGAGTAC
ATCAACAGCA AGAACGAGAT CATCGAGACG CATGACCGGA AGACCCGCGA TTTTTTCAAG
AACCTCGAGG CCAAGGTCAA GGACGCCGGA TTCGTCCTCG TGAACATGCA GATGGGGCAG
GTGCAGCGGC CCGACATCGT CCCCATGGTG GACGGAGAAC CCGTGCACCT GCTCAAGCTG
GAGGAGATGG CCGAGAAGGG GCGCTTCCCC CGCGAAGAAC TGGTGCAGTT GCAGGCCAAG
TACAAGGTGC TCAAGGAGGA GATAGACACC ATATTCCTTG AGGTGCGTGA ATTGCAGAAG
GAGGTCAAAC GCAAGAGCGA AGAGGTGGAC AGGCTCATGT TCCTCAACGC CGCGCGCGAC
CTCGCCCGTC CGCTTTTCGC TGAATACGCC GAGGAGAAGG TCGTCGCGCA CTTCGAGGGC
ATGTTGCAGC ACATGTCCGA CAATCTCGAC GCCCTGCGCG CCATGGGGCA GCCCCAGCAA
GGGCCCATGG GCATGTTCGT GCCCGTCACG GCAGAGAGTG TGCTGCATGA CTATCAGGTG
AACCTTCTCG TCGACAATTC CGGGCTTGAA GGTCCCCCCA TCATCTTCGA GTCGTACCCT
ACGTACCGCA AGCTCTTCGG CAGCATAGAG CGCGCCATGG ACAGGTCTGG CCTGTGGCGT
ACGGATTTCA CCAAGATCAA CGCCGGGTCG TTCGTCAGGG CCAACGGTGG CTATCTGGTG
CTCAACCTCA TGGATGCCAT CTCCGAACCG GGAGTCTGGC AGACGCTCAA GCGGGCACTC
AAGACCTCTG AAATCGAGAT ACAGACCTTC GACCCCTACT ACTTCATCAC GGCGCAGGGC
CTCAAGCCGG AACCCGTGAA GATGGAAGTG AAGGTCGTGG TGCTTGCCAC TCCGCAACTC
TACCACATGC TGCGCCACTA CGACCCCGAG GTCACCAAGA TATTCAAGGT GTGGGCGGAC
TTCGATTCGG TGATGAACCG TGACGACGCC GCTGTGGAGG CAGTCACGCG GCTCATGGCC
TCGTTCGCGA ACGAGCGCAA GCTCATGCCT TTTGGGCGTG AAGCCGTCGC CCTCTTGCTT
GAGCACAGCG TCCGGCTTGC CGGACGGCGT GAGAAGATGT CCACCACCTT CCCGGCCCTT
TGCGACATCA TGGAAGAGGC GCATTTCTTC GCCCATGCCG CCGCGGCGGA GACCGTCGGG
GCAACGCATG TGCGTGATGC CATCCTCGCG CGGCGCGACA GGGCGGGGCA GTATGAAGAG
AAGGTCCAGG AGATGATCGA CCGTGGCAGC GTGTTCATCG ACACGGAAGG TGCCGTGGTC
GGTCAGGTCA ACGGCCTTGC CGTGTTCGGC GTGGGAGACC ACATGTTCGG TAAGCCCACG
CGCATCACCG CCACAACGGC CATGGGGCGC GAGGGCATCA TCAACATCGA GCGCGAGTCC
GACCTTTCCG GTGCCATCCA TAACAAGGGC ATGCTCATCC TCGCAGGCTT CCTGCGCCGC
CGCTTCGCGC AGGACAAGCC GCTGACTCTG GCTGCGTCCA TCGCCTTCGA ACAGTCCTAT
GGTGGTGTGG ATGGCGACTC CGCCTCCAGT ACCGAGCTTT ACGCCATCCT TTCCAGCCTC
GCCGGAGTAC CGCTTTCGCA GGGGATAGCG GTGACGGGGT CCGTCAACCA GAAGGGCGAG
GTGCAGCCCA TAGGCGGTGT GAACGAGAAG ATTGAAGGCT TCTTCGAGTG CTGCCGACGT
AACGGTCTCA CGGATGGACA GGGGGTGATG ATTCCGGCTG CCAACGTGGG CGACCTCATG
CTGGACGAAG ACGTCATGGA AGCTGTGCGT GAGGGGCGGT TCCACATATG GGCCGTGAAG
ACCATTGAAG AAGGCATCGA ATTGCTGACC GGAATGCCTG CGGGCGTGCG GGGTGAGGAT
GGCACGTTCC CCGACGGGAC CCTCTTCGCC CTAGCCGATG CGCGGCTGCG TGCCCTCGCC
GAAGGGCTGA AGGCCTTTGG CGAGAAGAAG GATGATGCCC AGGCATAG
 
Protein sequence
MSIPGAISPL AVEQLRWTVD PSSLPFSTTS DLSAHDGIIG QRRGVEAFRF GMGMDGRGYN 
IFVTGASGIG KLAMTRQLLQ QAGGGVVPDD LCYVNNFTVP EEPVLLRFPA GRGKRFKADV
QAFLDTIKRD IPQLFESQEY INSKNEIIET HDRKTRDFFK NLEAKVKDAG FVLVNMQMGQ
VQRPDIVPMV DGEPVHLLKL EEMAEKGRFP REELVQLQAK YKVLKEEIDT IFLEVRELQK
EVKRKSEEVD RLMFLNAARD LARPLFAEYA EEKVVAHFEG MLQHMSDNLD ALRAMGQPQQ
GPMGMFVPVT AESVLHDYQV NLLVDNSGLE GPPIIFESYP TYRKLFGSIE RAMDRSGLWR
TDFTKINAGS FVRANGGYLV LNLMDAISEP GVWQTLKRAL KTSEIEIQTF DPYYFITAQG
LKPEPVKMEV KVVVLATPQL YHMLRHYDPE VTKIFKVWAD FDSVMNRDDA AVEAVTRLMA
SFANERKLMP FGREAVALLL EHSVRLAGRR EKMSTTFPAL CDIMEEAHFF AHAAAAETVG
ATHVRDAILA RRDRAGQYEE KVQEMIDRGS VFIDTEGAVV GQVNGLAVFG VGDHMFGKPT
RITATTAMGR EGIINIERES DLSGAIHNKG MLILAGFLRR RFAQDKPLTL AASIAFEQSY
GGVDGDSASS TELYAILSSL AGVPLSQGIA VTGSVNQKGE VQPIGGVNEK IEGFFECCRR
NGLTDGQGVM IPAANVGDLM LDEDVMEAVR EGRFHIWAVK TIEEGIELLT GMPAGVRGED
GTFPDGTLFA LADARLRALA EGLKAFGEKK DDAQA