| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_1601 |
|---|
| Symbol | |
|---|
| ID | 4664876 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris DP4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008751 |
|---|
| Strand | - |
|---|
| Start bp | 1898958 |
|---|
| End bp | 1900568 |
|---|
| Gene Length | 1611 bp |
|---|
| Protein Length | 536 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639819838 |
|---|
| Product | beta-lactamase domain-containing protein |
|---|
| Protein accession | YP_967045 |
|---|
| Protein GI | 120602645 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGTCC AGTTTCTTGG AGCTGCCCAG ACGGTGACCG GCTCCTGCTA CATGATAGAG
GCCAACGGTG TTCGCTTCGC CATCGATTGC GGCATGCATC AGGGCAACAC CGAAATCGAA
AAGCGTAACG ATGATACCGA GATCTATCGT CCATCCGACA TAGCCTTCTT TCTGGTCACC
CACGCGCATA TCGACCATAC GGGGCTGCTG CCCGCCATGA CGCGCAACGG GTTCACCGGC
CCCATATACT GCACAGAACC CACAGCCGAC CTGCTTGGCA TCATGTTGCA GGACAGCGCG
CACATCCAGG AGATGGAAGC GGAATGGCAA AGCCGCAAAC TCTCCCGCAA CGGGCGCATC
AAGAAGGTCG AACCGCTCTA TACGACCGAA GACGCCACCC GGGCGGCCGA GATGCTGCGT
CCGGTGGACT ATGGCAACTC GTTCGAACCT TCGCCCGGCA TCCGTGTGAC ATACAAGGAC
GCGGGGCACA TCCTCGGTTC GGCGTTCCTC GAACTTGAAG TCACGGAAAA CGGCAGACCC
ACACGGCTCG TCTTCTCGGG CGACCTCGGC AGGCCCGACG CCCTCATCGT CAACGACCCG
CAGAAGGCTG CCCCGGCGGA CTATCTCTTT CTCGAGTCCA CCTATGGCGA CCGCGACCAC
AAAGACCCAC GCTTCAGCCG CGACGAACTG GCTGAAGCCA TCGCCTACAG CTACGGCAAT
GGCGAAAAGG TCATCATTCC CGCCTTCGCC GTCGAACGCA CGCAGGAAGT GCTCTACACT
CTCTACCTGC TGCACAAGGA AGGCAGACTG CCTGCCGACA TGCCCGTCTT CGTGGATAGC
CCGCTGGCCA TAAGAGCTAC CGAGATATTC CGCAAGCATC CGAAATATTA TGATGATAAT
ATGAAGAAGC TTGTAGATTC GGGCGAAGAC CCGCTGGCGC TGCCCAACCT GAAATACACG
CTCAATACGC AGGATTCGCA GGCCCTCAAC GTGCGGTCTG GCCCGGCTGT CATCATCTCC
GCCAGCGGCA TGTGCAATGC AGGGCGCATC AAGCACCACC TGCGGCACAA CCTGTGGCGG
CCCGGTGCCA GCATCGTCTT CGTGGGCTAT CAGGGCGTAG GCACACCCGG CCGCAAGATT
GTCGACGGCA ATGCCACGGT GCGCCTGTTC AACGAAGACA TCGCCGTCAA GGCCAAGGTC
TTCACCATCG GCAGCTTCTC GGCACATGCG GGCCAGAGTC AGATTCTGGA ATGGGTGTCG
GCTTTCGCCC ATCCCCAGAT GGAGGTATTC CTCGTCCACG GCGAAGAGAA GGCACAGACG
ACGCTTGCCG GACTGTTGCG CGAGCGTTTC AACCTTCCGG TGTCCATACC CGGCTATCTT
GAAGAGGTCA CGCTCAAGCC GGGGCGCGAG TCGTTGCACC AGACCGACGA GGCACGGGCA
CATCCCGACG TCGACTGGGA ATTCCTGCTT GCCGAGACCG AGGGCAAGGT GGCACAACTC
CGCAAGCGTC TCGCGGGCGT GGAGAAGCGG CCTTGGGTCG AACAGACCGA CATCCGCGAA
CGCCTCGTCG AGATCAATGG CGAACTGTTG CATTTCCTTT CGCAGTTGTA G
|
|---|
| Protein sequence | MKVQFLGAAQ TVTGSCYMIE ANGVRFAIDC GMHQGNTEIE KRNDDTEIYR PSDIAFFLVT
HAHIDHTGLL PAMTRNGFTG PIYCTEPTAD LLGIMLQDSA HIQEMEAEWQ SRKLSRNGRI
KKVEPLYTTE DATRAAEMLR PVDYGNSFEP SPGIRVTYKD AGHILGSAFL ELEVTENGRP
TRLVFSGDLG RPDALIVNDP QKAAPADYLF LESTYGDRDH KDPRFSRDEL AEAIAYSYGN
GEKVIIPAFA VERTQEVLYT LYLLHKEGRL PADMPVFVDS PLAIRATEIF RKHPKYYDDN
MKKLVDSGED PLALPNLKYT LNTQDSQALN VRSGPAVIIS ASGMCNAGRI KHHLRHNLWR
PGASIVFVGY QGVGTPGRKI VDGNATVRLF NEDIAVKAKV FTIGSFSAHA GQSQILEWVS
AFAHPQMEVF LVHGEEKAQT TLAGLLRERF NLPVSIPGYL EEVTLKPGRE SLHQTDEARA
HPDVDWEFLL AETEGKVAQL RKRLAGVEKR PWVEQTDIRE RLVEINGELL HFLSQL
|
|---|
| |