| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_1588 |
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| Symbol | |
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| ID | 4664685 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris DP4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008751 |
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| Strand | - |
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| Start bp | 1887074 |
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| End bp | 1889617 |
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| Gene Length | 2544 bp |
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| Protein Length | 847 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639819825 |
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| Product | ATP-dependent helicase HrpB |
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| Protein accession | YP_967032 |
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| Protein GI | 120602632 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | [TIGR01970] ATP-dependent helicase HrpB |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.41464 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTCCTG AACAGACATC CTTCCGGCGT CTCGCGACGC CCTCTCTCGT CTCCGCCCTG
CCACGCCTCA CGGATGCGCT GCTTTCGGCC GGGCGCTGCG TTTTTGTTGC CCCACCGGGG
GCAGGCAAGA CCACGGTTGT GCCTCTTCAT CTGCTTGATG CCCCGTGGTT GCGGTCGCGG
CGCATTGTCA TGCTGGAGCC ACGTCGCCTC GCCGCGCGGG CTGCTGCCCG TTTCATGGCG
CGGCTTCTCG GTGAGCAGGT GGGCGAGACG GTAGGCTACC GGATGCGTCT GGACAGCCGT
GTCGGGCCAC GTACCCGCAT GGAGGTCGTC ACAGAAGGGG TTCTCGGGCG CATGCTGCAC
GACGACCCGA CCCTCGAAGA GTATGGCCTT GTCATCTTCG ACGAGTACCA TGAGCGCAGT
CTCCAGGCCG ACCTCGGTCT GGCCCTCTGC CTCGATGTGG CGGATGCCTT GCGCGACGAT
TTGCGGCTTC TCGCCATGTC GGCGACACTC GACGCCGCCC CGTTGGGCTC GCTGATGGGC
GGGTGTCCCG TCATCGAGTG CGAAGGACGC CAATGGCCCG TCGAGGTTCG CCACGCGCCT
CCAGTTAACA GGGCGGGGTA TCCCTCCAGC TTCGAGGACA ATGTCGCCGC CTGCGTTCGC
CGTGCGCTTA CCGAGACAGA GGGCGACGTG CTTGTCTTCC TGCCGGGGGG CGGGGAGATA
CGGCGTACCG CGCGGCGGCT TGAAGGGCTT GATGCCCACG GCGTCGGCGT GCACATGCTC
TATGGCGACC TTGCCCCGGC GTTGCAGGAT GCAGCCCTCG CGCCGGATGC ATCGGGGGGG
CGCAAGGTCG TTCTCGCCAC AGCCCTTGCC GAGACCAGCC TCACCATCGA GGGCGTGCGG
GTTGTCGTTG ACGGCGGACT GGCCCGTTTT TCCCGGTTCG ATCCGCAAAG CGGCATGAGC
CGCCTTGTGA CAGAACGTAT TTCTCTCGCC GGGGCGACGC AGCGCGCAGG TCGCGCAGGG
CGTACCGGGC CCGGCTTCTG CTATCGCCTC TGGCATGAGG GCGAGACCGC TTCCCTGCGT
CCGTTCGCAC GTCCGGAAGT GCTCGATGCC GACCTCGCCC CCCTGTTGCT GCAGTTGGCT
GCATGGGGCG TGCTCGACCC CTCGAAACTC AGGTGGCTCG ACGCTCCGCC AGAGGTCAAC
GTCAATCAGG CACGCATCCT GTTGCAATCG CTCGGTGCGA TCGATGCTTC CGGTCGTATC
ACCGGTCATG GCAAGTCCAT GAATGCCCTG CCGCTGCACC CGCGTCTTGC GCATATGGTG
CTCTCTGCCT GCCGCAGTGG CTCTGCTTCT CTTGCCTGTG TTCTTGCCTG CCTGCTTGAA
CAGCGCGGAG TTGCAGAGCG GACGTCCGGT TGCGACATCC GTCCATGGGT CGAAGATGCC
GTCAGGCGCA TGAGGCACAA GCCCCGAGGC GCCTCCCGTG AAGGATGGGA GGTGCGTCTG
GCATCGTCGG TCGACCGCAT CGCCGCGCTC GCCGGAGTCC GGTTCGATGC TGGCAGGGCC
CTGTCAGACG TGGCACGGTG CGGCGTTCTT CTCGGCTTCG CCTTCCCTGA CAGGGTGGCG
ATGAACACGG GGGAGGGCAC GTTTCGTCTT TCGTGCGGGC GTGGGGCAGC CGTGCCTGCC
GACGATGCGC TGGCACGTGA GCCTTTTCTC GTTGCCGCCG AACTCGACGG TGACGTCACC
CGTGCGCGTA TCTGGCGGGC TGCACCTCTC GCTGCGGAAG AGGTGGCGAT GCTCGCCGGG
GATGCCATCA CGGAACAGCG CGAGGTCGGA TGGGACGACA GGCGGGGCGT AGCGGTCGCC
CATGTCGAAC GCAGGTTCGG AGCACTCGTG CTGGAGCGCC GCCGCATCGA CGACGTCGAT
GATACGCTTC TGGCACATGC CGTCATGAGG GGGATTCGTA CGCGCGGGTT GCGGTGTCTT
CCGTGGACGC AGGAACTGCG GCAATGGCAG GCAAGGGTCG AGCTCATGCG GCGTCACGAC
ACTCCTGGAG GGCAATGGCC CGAGGTCGCA GACACAAGAC TTGAAGCTGA ACTTGAAGAA
TGGTTGATCC CCTTTCTGTC AGGCATACGG CGTGCCGAGC ATTTCGCGCG CATCGACCTG
CAGAGTGCCT TGAAAAACCT GCTCTCATGG GAACAGGCAC GCCGTCTGGA TGCCGAAGCC
CCGACGCATG TGGTGGTCCC TTCCGGTTCA CGTGTGCCCC TCGACTATAC GGCGGAGGGC
GGACCCGTGC TTGCGGTCAA GCTGCAAGAG CTTTTCGGCA TGGCCGAATC TCCGGTTGTG
GCGGGTGGTG TCTCTGTCGT CGTGCATCTG CTGTCTCCGG CTGGTCGGCC CTTGCAGGTG
ACACGCGACC TCGCAGGTTT CTGGCGCACG GGCTACGCTT CTGTCCGCGC AGAGATGCGG
GGGCGGTACC CCAAGCATCC ATGGCCGGAA GACCCGCTCA CGGCGATGGC GACCCGCCAT
ACGCGAAAAC GGGCAGGGCT GTGA
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| Protein sequence | MPPEQTSFRR LATPSLVSAL PRLTDALLSA GRCVFVAPPG AGKTTVVPLH LLDAPWLRSR
RIVMLEPRRL AARAAARFMA RLLGEQVGET VGYRMRLDSR VGPRTRMEVV TEGVLGRMLH
DDPTLEEYGL VIFDEYHERS LQADLGLALC LDVADALRDD LRLLAMSATL DAAPLGSLMG
GCPVIECEGR QWPVEVRHAP PVNRAGYPSS FEDNVAACVR RALTETEGDV LVFLPGGGEI
RRTARRLEGL DAHGVGVHML YGDLAPALQD AALAPDASGG RKVVLATALA ETSLTIEGVR
VVVDGGLARF SRFDPQSGMS RLVTERISLA GATQRAGRAG RTGPGFCYRL WHEGETASLR
PFARPEVLDA DLAPLLLQLA AWGVLDPSKL RWLDAPPEVN VNQARILLQS LGAIDASGRI
TGHGKSMNAL PLHPRLAHMV LSACRSGSAS LACVLACLLE QRGVAERTSG CDIRPWVEDA
VRRMRHKPRG ASREGWEVRL ASSVDRIAAL AGVRFDAGRA LSDVARCGVL LGFAFPDRVA
MNTGEGTFRL SCGRGAAVPA DDALAREPFL VAAELDGDVT RARIWRAAPL AAEEVAMLAG
DAITEQREVG WDDRRGVAVA HVERRFGALV LERRRIDDVD DTLLAHAVMR GIRTRGLRCL
PWTQELRQWQ ARVELMRRHD TPGGQWPEVA DTRLEAELEE WLIPFLSGIR RAEHFARIDL
QSALKNLLSW EQARRLDAEA PTHVVVPSGS RVPLDYTAEG GPVLAVKLQE LFGMAESPVV
AGGVSVVVHL LSPAGRPLQV TRDLAGFWRT GYASVRAEMR GRYPKHPWPE DPLTAMATRH
TRKRAGL
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