Gene Dvul_1564 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_1564 
Symbol 
ID4664393 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp1854014 
End bp1855750 
Gene Length1737 bp 
Protein Length578 aa 
Translation table11 
GC content63% 
IMG OID639819798 
Productpyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein 
Protein accessionYP_967008 
Protein GI120602608 
COG category[C] Energy production and conversion 
COG ID[COG0674] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit
[COG1014] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.916212 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCAGG CGCCTCGGAG CATTGTCATC GGTGGCGAAG CGGGGCAGGG GCTTGTGACC 
ATCGGCGACA TGCTGGTGCG CACACTTATC CGTAGTGGTT ATGGAGTGCT GGTAGCCCAG
CATTACATGT CGCGGGTGCG GGGAGGGCAC AACACCTACA ACATCCGGGT CGGTGCCGGA
GATGTCCTTG CACCCACGGA TGATGTGCAT GTGCTCGTCG CGCTCGACCA GCGCACAGTC
ACGGAACAGG GACCCCGGCT GGGCGATGGG CTGCTCATCC TTGATGAACG TCTCGACCCG
GGTTCCCTCA ACGCCTTGCG TGTTCCGTTT GCGGCGCTTG CCGGGCGTCC CCTGTATGAG
AATATTGCCG CTCTCGGCGT GCTCGCAGCC CTGCTGGGGC TGGAACGTGC CCCGGTCGAC
CGTCTGGTCG GGGAGGCTTT CCACAAGAAG GGCGATGACG TCATCACGCG CAACCTCGAG
GTGCTTGAGG CCGCATGGCG ATGGGCATCT GACCATCGTG CCGCATCCGA ACCGTTATCC
GCGCCGGAAG GGCCGACAGG TCGGATGATG CTGCAAGGGA ATGAGGCCAT CGCACTGGGG
GCACTGGCAG CGGGCGTGAA GTTCTGCGCT TTCTATCCCA TGACGCCAGC CACATCGGTC
GCCCAGAATC TCATCCTTCA TGCGGAGCGC ATGGGAGTTG TCGTAGAGCA GGCCGAGGAT
GAAATCGCCG CCATGAACAT GGTGCTCGGG GCCAGCTATG CTGGCGCGAG GGCGCTCGTG
CCCACATCGG GCGGAGGGTT TGCGCTCATG ACCGAGGGGG TGAGCCTTGC GGGTGTCATG
GAACAGCCCG TGGTCATCGT GCTGGCGCAG CGGCCCGGCC CCGCGACGGG GTTGCCGACG
CGCACCGAAC AGGCAGACCT CGACCTCGCA CTCTATGCGG GACACGGAGA GTTCCCCCGT
GTCATCTTCG CCCCTGCGAC GCCCGAAGAT TGCTTCCACC TCACGTACGC GGCCTTCGAC
CTGGCAGAGC GCTTCCAGAT TCCGGCCTTT GTGCTGACCG ACCAGTATCT CGCCGATTCC
TACAGGCCCG TTGCGCCCTT CGACCTCGAC GCGCTGCCGC CGCTTGCCGA GCCTGATTTC
TCCACGGACA AGGGGCCGGA GGGCGACAGG TACAAACGGT ACGAATTGAC CGAAAGCGGT
ATCTCTCCTC GTAGGATTCC GGGGTTCTCG AAATCCCTGG TACTGGCAGA CTGTCATGAG
CACACGGAAC AGGGATACAT CACGGAAGAC GTCGGCTTGC GGATTGCCAT GAGCGACAAG
AGGCTTCGCA AAGGCGATGG ACTGCGTTCC ATGGCGCTGC CCCCAAGGTG TTTCGGGGAT
GAAGTGCCTG ACTTGCTGCT CGCCTGCTGG GGTTCCAGTG AAGGTGCCGT GGTCGAGGCT
GCACAGCGCT TGCGTGCCCG CGGGCGCAAG GTCGGGGTGC TTTCGTTCAC ACAGGTGTGG
CCACTCGAAC CTTCGCAGTT TCTTTCCCGG TGCGGGGAGG CCACCGAGGT CGTGTGCATC
GAGGGCAACG CCACAGGGCA GTTCTCTCGC CTGTTACGGC TTGCCGGAGT AACCGTCGGG
CGTACGCTCC TTCGCTATGA CGGCAGGCCG TTCACACCGG AATGGATCGT CGCGCATCTT
ACGGCAGGGG ATTCGGGAAC GTCACACATG CAGACCGCCA AAGGAGCCTC CGCATGA
 
Protein sequence
MQQAPRSIVI GGEAGQGLVT IGDMLVRTLI RSGYGVLVAQ HYMSRVRGGH NTYNIRVGAG 
DVLAPTDDVH VLVALDQRTV TEQGPRLGDG LLILDERLDP GSLNALRVPF AALAGRPLYE
NIAALGVLAA LLGLERAPVD RLVGEAFHKK GDDVITRNLE VLEAAWRWAS DHRAASEPLS
APEGPTGRMM LQGNEAIALG ALAAGVKFCA FYPMTPATSV AQNLILHAER MGVVVEQAED
EIAAMNMVLG ASYAGARALV PTSGGGFALM TEGVSLAGVM EQPVVIVLAQ RPGPATGLPT
RTEQADLDLA LYAGHGEFPR VIFAPATPED CFHLTYAAFD LAERFQIPAF VLTDQYLADS
YRPVAPFDLD ALPPLAEPDF STDKGPEGDR YKRYELTESG ISPRRIPGFS KSLVLADCHE
HTEQGYITED VGLRIAMSDK RLRKGDGLRS MALPPRCFGD EVPDLLLACW GSSEGAVVEA
AQRLRARGRK VGVLSFTQVW PLEPSQFLSR CGEATEVVCI EGNATGQFSR LLRLAGVTVG
RTLLRYDGRP FTPEWIVAHL TAGDSGTSHM QTAKGASA