| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_1549 |
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| Symbol | |
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| ID | 4662551 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris DP4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008751 |
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| Strand | + |
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| Start bp | 1839178 |
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| End bp | 1840248 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639819782 |
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| Product | sigma-70 region 2 domain-containing protein |
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| Protein accession | YP_966993 |
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| Protein GI | 120602593 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02392] alternative sigma factor RpoH
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000354786 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAAAC GCCCGAAAGC GCAACACGAA GACATCGCCG ATGAGAAGCA CGTCACCGTA
GTCGACGACG TCGAGATCAT CGACGGCCCG GACGATTCGG CTGACGACAC CGAAGATACC
GAAGATTTCG TCGACGAAGA CGATGTCATA GACATCGGCG ACGACGACCA CGCGCCCGAC
ACGTTCCACC TCAACGCTCC TGCCACGGTA TCCACCGGGA AGGACAGCCT GCACCTCTAC
CTGCGCGAGA TAAGCCGCTT TCCCATGCTC AAGCCCGAAG AGGAGTATGA GCTGGCGAAG
CGTGTCCGCG AAACGGGCGA CGGTGATGCG GCCTTTCGCC TCGTCTCGTC GCACCTGCGT
CTCGTGGTGA AGATCGCCAT GGACTTCCAG CGGCGCTGGA TGCAGAACGT GCTCGACCTC
ATCCAGGAGG GCAACGTCGG CCTCATGCGC GCGGTGAACA AGTTCGATCC CGAAAAGGGC
ATCAAGTTCT CGTATTACGC CGCCTTCTGG ATCAAGGCCT ACATCCTCAA GTTCATCATG
GACAACTGGC GGATGGTCAA GATCGGCACC ACGCAGGCGC AACGCAAGCT GTTCTACAAT
CTCAACAAGG AACGACAGAA GCTCATCCTG CAGGGCTACG ACCCGGACGC AGCCACCCTG
TCGGAACGCC TGAACGTGAC CAAGGAACAG GTCGTGGAGA TGGAACAGCG CCTCGACGCT
TCCGACGTGT CACTCGACAT CCCGGTGGGT GACGAGGGCG GCGGGGCTTC GCGCATGGAC
TTCCTGCCCG CACTCGGCCC CGGCATCGAG GACGCACTGT CGAACCATGA GATTGCCAGC
ATGGTGCAAA ACCGTCTGCA ATCCATCATT CCCAAGCTTT CCGACAAGGA AGTGGACATC
CTGCAGAACA GGCTTCTTTC TGAAGAACCA GTCACCTTGC GCGAGATTGG CGAGAAATAC
GACATCACCC GTGAACGCGT CCGCCAGATA GAGGCGCGTC TGCTGCAAAA GATACGCGAC
CACCTGTTCA AGGAAATCAA GGACTTTTCA TCCGACTGGA TCAACCAGTA G
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| Protein sequence | MTKRPKAQHE DIADEKHVTV VDDVEIIDGP DDSADDTEDT EDFVDEDDVI DIGDDDHAPD
TFHLNAPATV STGKDSLHLY LREISRFPML KPEEEYELAK RVRETGDGDA AFRLVSSHLR
LVVKIAMDFQ RRWMQNVLDL IQEGNVGLMR AVNKFDPEKG IKFSYYAAFW IKAYILKFIM
DNWRMVKIGT TQAQRKLFYN LNKERQKLIL QGYDPDAATL SERLNVTKEQ VVEMEQRLDA
SDVSLDIPVG DEGGGASRMD FLPALGPGIE DALSNHEIAS MVQNRLQSII PKLSDKEVDI
LQNRLLSEEP VTLREIGEKY DITRERVRQI EARLLQKIRD HLFKEIKDFS SDWINQ
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