| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_1548 |
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| Symbol | |
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| ID | 4664350 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris DP4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008751 |
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| Strand | - |
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| Start bp | 1836558 |
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| End bp | 1838972 |
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| Gene Length | 2415 bp |
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| Protein Length | 804 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639819781 |
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| Product | homocysteine S-methyltransferase |
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| Protein accession | YP_966992 |
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| Protein GI | 120602592 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain
[COG1410] Methionine synthase I, cobalamin-binding domain |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0662443 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCAGATT TCCGTCAAGC CTTGCGCGCA GGGCGCAGAC TTCTTTTCGA TGGTGGCCTC
GGAACCATGT TGCAGGCCCG TGGCCTGCCC GCCGGGGTAA GCCCCGAGCA GTTCTGCCTT
GATCGTCCCG ATGTCCTTCG TGGCATCCAT GCCGACTATG TGCGTGCAGG GGCCGACATC
CTGACCACCA ACACCTTCGG CGGAAGCCGC TTCAAGCTCG GCGACGGGTT CGACGTGGTC
GACTTCAACC GTCGCATGGC CGCCATCGCC CGTGAAGCTG CAGACGCATC TGGCAGGCAG
GCTTTCGTCG CAGGCAGCAT AGGCCCGACG GGGCATTTCG TGAAACCACT CGGAGAGGTG
GAGCCTGCCG CGTTAGTCGC CGCCTTTCGG GAGCAGGTGC GCGGGCTTGT CGCAGGTGGT
GCCGATCTCC TGATGATCGA GACACAGTTC GACCTTGCCG AGGCGCGTGC CGCTGTCGTC
GCAGCCCGTG CGGAGTGTTC GCTTCCCATC GCCGTCTCCA TGACGTTCGA GAATGGTGTC
AGCCTCACGG GCAGCACACC CGAGGTGTTC GTCGCCACCA TGCTCAACCT CGGGGTGGAC
CTGCTGGGCA CCAATTGCAG TGCAGGGCCC GACCAGATGC ATGATGTGGT GGCCTCGCTG
CTGGCGTCCG CTTCCGTGCC GGTGCTCGTC GAGCCCAATG CCGGATTGCC CGAACTCATC
GACGGCAAGA CTGTGTTCAG GCTGCCCCCC GCCCCGTTCG CCGAGAAGAC GGCTGCCTTC
GCCGCCATGG GGGCGCGTGT GCTTGGCGGC TGCTGTGGCA CGACACCCGA CCATATCGCA
GCCCTGCGGC AGGCAGTGGC CGATATTCCC GCCACGCTTC CGGTGGACAG TGGCGTGGGC
ATTGTCCTCA CCACGAGGTC GCACCTCGTG CGGGTGGGTG GTGACGCCCC GGTGCGCATC
ATCGGTGAAC GCATCAACCC CACAGGCAAG AAGCAGCTCA TAGCCGAATT GCAGGCGGGC
GACTTCTCGC TGGCGTTGCG CTTCTCCGAC GAACAGGTCG AGGCGGGGGC GCCCATTCTC
GACGTGAACG TGGGCGCGCC CATGGTGGAT GAGGAAGTGC TGCTGCCCGA CCTCGTGCAG
CGACTCATCA CCCGGCACGG GGTGCCGCTA TCCATCGACT CGTCCAATGC CGCTGCCATC
GAACGTGCGC TGCCCTATTG CCCCGGTTCG ACGCTCGTCA ACTCCATCAG CGGCGAACCG
GGCCGCATGG AACGCCTCGG CCCCTTGTGC CGCGACCACG GTGCCCCCTT CATCCTGCTG
CCTCTCAAGG GACGCAAGCT GCCCGTGGCT GCCACGGAGC GCATCGCCAT CATCGAGGAA
CTCCTCGTTC AGGCCGAAGG GCTCGGCATC CCGCGCCGTC TTGTCATGGT CGACGTGCTG
GCGCTTGCCG TATCCTCCAA GGCGGAGGCT GCGCGGCAGT GTCTCGAGAC CATCCGCTGG
TGTACGGCCA ACGGCTTTGC CACGACCATA GGTCTGTCGA ACATCTCGTT CGGCCTGCCC
GCCCGGGAAC TGCTCAACGG CACGTTCCTC GCCATGGCGG CGGGGGCAGG TCTGAGTTCG
TGCATCGCCC ACCCCGGCAA CGGGCGCATC CGCGAGACGG TGGCATGTGC CGACGTCCTG
CTGGCGCGAG ATGCCAACGC CGAACGGTTC ATCGACGCCT ACGCGGCGTG GACGCCCGCG
ACACAGGGCG GCCCCGTGGC CAGCGGCCCC GGCCTTGCGT CCCAGCCGCC GGCGACCACA
CTTGAAGAGG CGGTCGTGAA AGGCGACCGT GATGGTGTCA CGGCCATCGT GGAGAGTGAG
CTCGCTGCCG GGGCAGACCC CTTCGACCTT GTACAGACCA AGCTCATTCC GGCCATCAAC
GAGGTCGGCG TCAAATACGA GCGCCGCGAA TATTTCCTGC CCCAGCTCAT CCGTTCGGCA
GAGACCATGC AGACGGCCTT CAGGCGATTG CAACCCCTGC TGGAGGAGAT GCGCGGGGCC
GAGGTGCGCC CGGTCATCAT CATGGCTACT GTCGAGGGTG ATATCCACGA CATCGGCAAG
AACATCGTCT CGCTCATGCT GGGCAACCAT GGCTTCGAGG TCGTCGACCT CGGCAAGGAT
GTGAAGGCCG AGACCATCGT CGACGCGGCA GAGACCCACG GTGCACGTAT CATCGGGCTC
TCCGCCCTCA TGACGACCAC CATGGTGCGC ATGGAGGATA CGGTGAAGCT TGTGCGTGCC
CGCGGGCTGG ATGTGAAAGT CATCGTGGGC GGGGCCGTCG TGACCAAGGC CTTCGCCGAC
GCCATCGGGG CGGACGGTTA TTCGGCCGAT GCCGTCGAAG CCGTCAGACT TGCAAAATCG
CTTCTCGCCG GGTAA
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| Protein sequence | MPDFRQALRA GRRLLFDGGL GTMLQARGLP AGVSPEQFCL DRPDVLRGIH ADYVRAGADI
LTTNTFGGSR FKLGDGFDVV DFNRRMAAIA REAADASGRQ AFVAGSIGPT GHFVKPLGEV
EPAALVAAFR EQVRGLVAGG ADLLMIETQF DLAEARAAVV AARAECSLPI AVSMTFENGV
SLTGSTPEVF VATMLNLGVD LLGTNCSAGP DQMHDVVASL LASASVPVLV EPNAGLPELI
DGKTVFRLPP APFAEKTAAF AAMGARVLGG CCGTTPDHIA ALRQAVADIP ATLPVDSGVG
IVLTTRSHLV RVGGDAPVRI IGERINPTGK KQLIAELQAG DFSLALRFSD EQVEAGAPIL
DVNVGAPMVD EEVLLPDLVQ RLITRHGVPL SIDSSNAAAI ERALPYCPGS TLVNSISGEP
GRMERLGPLC RDHGAPFILL PLKGRKLPVA ATERIAIIEE LLVQAEGLGI PRRLVMVDVL
ALAVSSKAEA ARQCLETIRW CTANGFATTI GLSNISFGLP ARELLNGTFL AMAAGAGLSS
CIAHPGNGRI RETVACADVL LARDANAERF IDAYAAWTPA TQGGPVASGP GLASQPPATT
LEEAVVKGDR DGVTAIVESE LAAGADPFDL VQTKLIPAIN EVGVKYERRE YFLPQLIRSA
ETMQTAFRRL QPLLEEMRGA EVRPVIIMAT VEGDIHDIGK NIVSLMLGNH GFEVVDLGKD
VKAETIVDAA ETHGARIIGL SALMTTTMVR MEDTVKLVRA RGLDVKVIVG GAVVTKAFAD
AIGADGYSAD AVEAVRLAKS LLAG
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