Gene Dvul_1517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_1517 
Symbol 
ID4662117 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp1803206 
End bp1803610 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content62% 
IMG OID639819750 
Productiojap-like protein 
Protein accessionYP_966961 
Protein GI120602561 
COG category[S] Function unknown 
COG ID[COG0799] Uncharacterized homolog of plant Iojap protein 
TIGRFAM ID[TIGR00090] iojap-like ribosome-associated protein 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0831178 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0026713 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAGACCA AAGAGAAGAA ATTCGTGACC CTGCCCACTG TGGACAAGGT CAAGGCCATC 
ATCGGCTGGC TTGAAGAGAA GAAGGCGCGC GACATCGTGG CCTACGACCT CGCGGGGCAG
AGCCCCTTCG CCGAGGCGCT CGTCATCGTC ACCGCCGGTT CGGTGCGGCA TGGGCAGAGC
CTCGCGGACC ACATGCTCGC CATGTGCAAC GAGAACAACT ACGAATACCT GCGCATGGAA
GGCTACCAGA CCGGGCAGTG GATTCTGGTC GACCTCAACG ACATCATCGT CAACGTCTTC
CAGCCCGAAA CGCGCGGCCT GTTCAAGCTC GAAAGCCTGT GGGCCAAGGC CCCTGTGCTG
CATGACGGGC GTGGCGAAGC CGCCGGAGGC GACGACGACC TATGA
 
Protein sequence
MQTKEKKFVT LPTVDKVKAI IGWLEEKKAR DIVAYDLAGQ SPFAEALVIV TAGSVRHGQS 
LADHMLAMCN ENNYEYLRME GYQTGQWILV DLNDIIVNVF QPETRGLFKL ESLWAKAPVL
HDGRGEAAGG DDDL