Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dvul_1510 |
Symbol | |
ID | 4662119 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris DP4 |
Kingdom | Bacteria |
Replicon accession | NC_008751 |
Strand | - |
Start bp | 1796632 |
End bp | 1797453 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639819743 |
Product | 2-dehydro-3-deoxyphosphooctonate aldolase |
Protein accession | YP_966954 |
Protein GI | 120602554 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2877] 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase |
TIGRFAM ID | [TIGR01362] 3-deoxy-8-phosphooctulonate synthase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0743191 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.0006331 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGCAACATC CCACCCCCGA TGCCCTCCAC GCCCGTCTCG CCGCAAGGCG CTTCATTCTT GCAGGCCCGT GCGCCCTTGA AGACTTCGAC GTCGCCATGG AGACAGCCCA TGCCGTGCGT GAGGCTGCCG AGGCCGCCGG GCTTTTCGCC GTCTTCAAAA GCTCGTGGGA CAAGGCCAAC CGTACTTCCA TCACCAGTTT CCGTGGCCCC GGTCTTGTGA GGGGCATGGA GTGGCTGGCC CGAATCCGTG AAGAGAGCGG TCTGCCTGTC GTCACGGACA TCCATCTTCC CGAACAGGCT GCACCTGTCG CCGAAGTCGC CGACATCATC CAAATACCGG CCTTCCTCTG TCGCCAGACG GACCTGCTTG TCGCCGCTGC CGCCACCGGG CGTGTGGTGA ACGTCAAGAA AGGGCAGTTC GTCGCGCCAT GGGACATGAG GCCCGCCGTG GAGAAGCTCC GTGCCGCAGG CAATGAACGC ATTCTGCTGA CCGAGCGCGG CACCAGTTTC GGGTACAACA ACCTTGTCGT CGACTACCGG TCCATCCCCA CCATGCAAGG GTTCGGCGTG CCAGTGGTAT TCGATGCCAC CCATTCGGTG CAGCTTCCCG GTGGTCTGGG CGGTTCCTCG GGTGGCGAAC GTCGTCATGT ACCCGTGCTC GCGCGGGCTG CCGTGGCAGC AGGGGTCGAT GGCGTGTTCC TCGAGTGCCA CCCCGACCCC GACAAGGCGT TGTGCGACGG CCCCAACAGC TGGCCTCTTG ACAGGCTGCC CGCCCTGTTG AAGGAACTTT CGGCCCTCTG GAGCCTCGAA CATGTCTGTT GA
|
Protein sequence | MQHPTPDALH ARLAARRFIL AGPCALEDFD VAMETAHAVR EAAEAAGLFA VFKSSWDKAN RTSITSFRGP GLVRGMEWLA RIREESGLPV VTDIHLPEQA APVAEVADII QIPAFLCRQT DLLVAAAATG RVVNVKKGQF VAPWDMRPAV EKLRAAGNER ILLTERGTSF GYNNLVVDYR SIPTMQGFGV PVVFDATHSV QLPGGLGGSS GGERRHVPVL ARAAVAAGVD GVFLECHPDP DKALCDGPNS WPLDRLPALL KELSALWSLE HVC
|
| |