Gene Dvul_1500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_1500 
Symbol 
ID4662284 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp1789672 
End bp1790133 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content58% 
IMG OID639819733 
ProductPTS system sorbose subfamily IIB component 
Protein accessionYP_966944 
Protein GI120602544 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3444] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.219995 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00883957 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTCTGGT ATCGCATCGA CAATCGCCTC GTACATGGGC AAATCATCGA GGCGTGGCTG 
CCCTATACCG GGGCCACTCG TCTGCTTGTG GTCAACGATG CGCTCGCATC CGACGACTTG
CAGCAGCAGA TTATCTCTCT GGCTATTCCG GGCAGGGTTG AAGTGCGTTT CTTGCGTGTC
GACGAACTCA AAGCCGTGGT GACTGCCGGT GGCGCGGGCA GGGTCGAGAC CCTCGTGCTT
GTCGCCAACT GCGGGGATGC CAGGCGCTTG CACGATGCTG GCGTGCAGAT AGGCGTACTC
AATGTTGGTA ATCTGCACTA TTCTCCTGGC AAGAAACAAC TTTGTGCCCA TGTGGCCGTC
TCGGACGAGG ACGAAGGCTG TATGCGCTAC CTGCAGCGCG GCGGCATAGA ACTCGACTTT
CGCTGTGTCC CCAACGACCC TGTAGAGATC AAGGGGTGGT GA
 
Protein sequence
MFWYRIDNRL VHGQIIEAWL PYTGATRLLV VNDALASDDL QQQIISLAIP GRVEVRFLRV 
DELKAVVTAG GAGRVETLVL VANCGDARRL HDAGVQIGVL NVGNLHYSPG KKQLCAHVAV
SDEDEGCMRY LQRGGIELDF RCVPNDPVEI KGW