Gene Dvul_1408 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_1408 
Symbol 
ID4665054 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp1710156 
End bp1710692 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content62% 
IMG OID639819639 
ProductNUDIX hydrolase 
Protein accessionYP_966853 
Protein GI120602453 
COG category[I] Lipid transport and metabolism 
COG ID[COG1443] Isopentenyldiphosphate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.797387 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGACA CCACTGAATA CATCGAAGTC ACGGATGATC AGGACAGACC CCTTGTCATC 
ATGCCCACGA ACGAAGCCGG CAGGCAACGT CTGCGCCGCC GGGTCGTGCT GGTGGCACTC
TATGACAGCC GGGGAAGGCT GTGCCTGCAA CGCCGTTCGC CGCACAAGCT CATCCATCCC
GGATGTTGGG ACCTTTCAGC CACCGGGCAT GTCAGGGCGG GCGAGTCACG AGACGAAGCC
GCCCTGCGTG AGTTGTCCGA AGAACTGGCC GTGACTGGGG TACGGTTGAG GCATATCGCG
ACTCTCGCGG CTTCGCAGGC GACAGCCAAC ACCCACGTCA CCCTCTTCGA GGCTTCAGGC
TATCGAGGGC TGCCGATTCC GTGCACCGAC GAGGTCACCG AAGTGACCTT TACAGACGCC
GACGAACTTC AGGGCCTTAT CACCCATTTC CCCGACCTGC TCACCCCCGC CCTTCTATGG
GCGGCACAGC ACGGTCATCT CTTCCCTTCC GTCACCAGAA GCGACACCAT GTCCTGA
 
Protein sequence
MSDTTEYIEV TDDQDRPLVI MPTNEAGRQR LRRRVVLVAL YDSRGRLCLQ RRSPHKLIHP 
GCWDLSATGH VRAGESRDEA ALRELSEELA VTGVRLRHIA TLAASQATAN THVTLFEASG
YRGLPIPCTD EVTEVTFTDA DELQGLITHF PDLLTPALLW AAQHGHLFPS VTRSDTMS