| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_1370 |
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| Symbol | |
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| ID | 4664805 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris DP4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008751 |
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| Strand | + |
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| Start bp | 1667626 |
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| End bp | 1669398 |
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| Gene Length | 1773 bp |
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| Protein Length | 590 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639819600 |
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| Product | RpoD family RNA polymerase sigma factor |
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| Protein accession | YP_966815 |
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| Protein GI | 120602415 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02393] RNA polymerase sigma factor RpoD, C-terminal domain
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.69514 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAATA TCAAGGAAAT TCAGCAGATC AAAAGCCTTA TCGCCAAAGG TAAGGTGAGC
GGCTTCTTGA CCTTCGATGA GGTCAACAAG GCCCTGCCTG CTGAGGTCAA CACTCCGGAA
CAGATCGAAG AGATCATCGG CATCTTCGAC CAGCTCGACA TCGCCATCGT CGACTCCGAG
AAGGACGGCA AGAAGATCAG CATGTCCCCG GGCGAGTCGG AGGAGGAGGC ACCTTCGGAG
GGTGGGCTTG ACCTTTCCGA CGACGAAGAG ACCGTCGACT ATTCGTCGCG CAGCACCGAC
CCCGTGCGGA TGTACCTGCG CGAGATGGGT TCGGTGCCGT TGCTCGACCG CGACGGCGAA
GTCGTCATCG CCAAGAAGAT CGAAATGGGC GAGCAGGACG TGCTGTACGC CCTTGTCGAG
GTGCCTGTCG CCGTCGAGGA ACTCGTCAAC GTCGGTGAAG ACCTCAAGCA GAACCGCATC
AAGCTGAAAG ACGTCGTCAA GACCATCGAA GAGGACGACC CCAGCGAAGA CGAGATGAAC
CAGCGGCAGC GCGTCATCCT CCTGCTTGAA GAGATTCGCA CCACGTTCAA GAAGAAGCGC
AAGGTCTACT CGAAGCTCGA TGAATGCTGC ACCCTTGAAC GGCGTGTGGC TTCTGTGCAG
CGAGAGATCA TGAACTACAA GGAAGACATC GTCTCGCGCC TGCGCGACAT CAAGCTCGAG
AAGACGCTCA TCGACCGCAT CATCGAGACT GTCGAGGACT ACGTGCGGCA GATGCACAAC
TGCCAGCGCG ACCTCTCTGC GTACATCCTC TCCACCGGCA AGACGCAGGC CGAGATACAG
GCGCTGTTCA GCGGGCTCGA AGCTCGTGAG GTCAGCCCGG TCGCGGCTTC GGCAGCCCTG
AACATGACGG TCGAAGAACT GTTCTCGTTC AAGGAGATGA TCCTCGGCAA GATCGAGATC
CTTTCCCGTC TGCAGGATAA ATGCTGTCAC AACGTCAACG ACCTCGAAGA GGTGCTTTGG
CGTATCAAGC GTGGCAACTC CATCGCCATG CGGGCAAAGC AGGAGCTCAT CCGCTCGAAC
CTGCGTCTCG TGGTGAGCAT CGCCAAGAAG TACACCAACC GCGGTCTGCA GTTCCTCGAC
CTCATTCAGG AAGGCAACAT CGGCCTCATG AAGGCTGTCG ACAAGTTCGA ATACCAGCGC
GGTTACAAGT TCTCCACCTA CGCCACATGG TGGATACGGC AGGCCATCAC CCGCGCCATC
GCCGACCAGG CGCGTACCAT ACGCATCCCT GTCCACATGA TCGAGACGAT CAACAAGCTC
ATTCGCACCT CGCGGTATCT CGTTCAGGAA CTGGGGCGAG ACCCGACGCC TGAAGAAATC
GCCGAACGGA TGGACTACCC CATCGACAAG GTCAAGAAGG TGCTGAAGAT CGCCAAAGAG
CCCATCTCCC TCGAGACCCC CATCGGCGAT GAAGAGGATT CGAGCCTTGG CGATTTCATC
GAGGACAAGA AGGCTGTCGC GCCTGCCGAG GAAGTGGTCA ACACCAAGCT TGGCGAGCAG
ATAGCCTCTG TGCTGGCCGA CCTGACCCCC CGCGAGGAAC AGGTGCTGCG CAAGCGCTTC
GGCATCGGGG AGAAGTCAGA CCATACCCTT GAAGAGGTCG GAAAACTGTT CAACGTCACT
CGTGAACGTA TCCGCCAGAT CGAAGCGAAG GCGTTGCGCA AGCTCCGTCA TCCTGTCCGT
AGCCAGACAT TGCGTTCCTA CTACGAGAGC TGA
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| Protein sequence | MSNIKEIQQI KSLIAKGKVS GFLTFDEVNK ALPAEVNTPE QIEEIIGIFD QLDIAIVDSE
KDGKKISMSP GESEEEAPSE GGLDLSDDEE TVDYSSRSTD PVRMYLREMG SVPLLDRDGE
VVIAKKIEMG EQDVLYALVE VPVAVEELVN VGEDLKQNRI KLKDVVKTIE EDDPSEDEMN
QRQRVILLLE EIRTTFKKKR KVYSKLDECC TLERRVASVQ REIMNYKEDI VSRLRDIKLE
KTLIDRIIET VEDYVRQMHN CQRDLSAYIL STGKTQAEIQ ALFSGLEARE VSPVAASAAL
NMTVEELFSF KEMILGKIEI LSRLQDKCCH NVNDLEEVLW RIKRGNSIAM RAKQELIRSN
LRLVVSIAKK YTNRGLQFLD LIQEGNIGLM KAVDKFEYQR GYKFSTYATW WIRQAITRAI
ADQARTIRIP VHMIETINKL IRTSRYLVQE LGRDPTPEEI AERMDYPIDK VKKVLKIAKE
PISLETPIGD EEDSSLGDFI EDKKAVAPAE EVVNTKLGEQ IASVLADLTP REEQVLRKRF
GIGEKSDHTL EEVGKLFNVT RERIRQIEAK ALRKLRHPVR SQTLRSYYES
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