Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dvul_1369 |
Symbol | |
ID | 4664794 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris DP4 |
Kingdom | Bacteria |
Replicon accession | NC_008751 |
Strand | + |
Start bp | 1665915 |
End bp | 1667633 |
Gene Length | 1719 bp |
Protein Length | 572 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639819599 |
Product | DNA primase |
Protein accession | YP_966814 |
Protein GI | 120602414 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0358] DNA primase (bacterial type) |
TIGRFAM ID | [TIGR01391] DNA primase, catalytic core |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0240791 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.628544 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGCGCA GGGACGGTAG TGTCGTTCAG GCCATAAAGA GTCGGCTCAA TCTTGTCGAT ATCGCGAGAA GATATGTCGA GCTCAGAAGG GCAGGTGGTC GCTGGATGGC GCCCTGTCCT TTCCATCAGG AGACGAAGCC TTCATTTTCG ATCAACGAGG AGGAGGGGTT CTTCTACTGT TTTGGTTGTC AGGCGTCCGG TGACCTCTTC GATTTCTACG GGCGCATAAA CGGACTCGAC TTTCGCGAGA CGCTTGAACA ACTCGCCGAA GAGGCGGGGG TGGCACTCGA CGACTGGAAG CCCGACCCGC GGGCGCAGCA GGAACAGTCG CTGCGGCGGC AATGTCTGCG GATGTATGAC GTGGCGCGTG CGCATTTCGT CGGCAACCTC GCGAAGCGGG AAGGGCAGGA ATGTCGCGAT TATATGCAGC GGCGTGCCAT CGCCCCGGAA ATCATCGAGA GTTTCGAACT CGGCTGGAGT CTGCGCGAAT GGCAGTCGCT GGCAGACACG TTGCGGCGTG CCGGTTTTGC GCAGGGGCTT GCCGTCAAGG CGGGTCTGCT TGCCACCAGT GACAGCGGAA GAGCCTATGA CAGGTTTCGT GGGCGATTGA TCTTTCCCAT AAAGAGTCTT GCCGGACAGG TCATCGCATT CGGCGGGCGT ATCATCGCCG AGGATGATCA GGCCAAATAT ATCAACAGTA GCGATTCGCC CATCTACAAG AAGGGCGACC ACCTGTACGG ACTGTATCAG GCGCGGCGCG CCATCTCGCA GCACAAGGTA GCCATGCTGA CGGAAGGCTA CATGGACGTG CTCACCCTGC ACCAGTTCGG CTACAACAAC GCCGTCGGGG TGCTTGGTAC GGCGCTCACG CCCGAGCAGG TGAAGCGGCT TTCGGGCTTC TGTTCGACTG TGGAGTTGTT GTTCGACGGC GACAACGCAG GGCGCAAGGC GGCCTTGCGC AGTTGCGAGA TGCTTCTGGT GCGCGGGATG CGTTGCAAGG TCGTTCTCCT GCCACAGGGA GAGGACATCG ACAGCCTGTT GCACGGGGCC GGGCGTGATG CTTTCGAAAG CATACGGAAC GAGGCCCCTG ATGGACTGGA TTTCTGCATG CGGAGTCTGG CGGCACAGGC CCCGCGAGAT ATGCTTGACT GGACGAAGGG GTTTCTCGCG CAGGTCGAGC AGCCCGAATT GCTTTCGTAT TACATAACGC GGCTTGCGGG CGGACTCGGC CTCAACGAGG CAGAGTTGCG TGACAGCCTT GCCGAGCGCG TCAAAGCGCA CGCAGCCGCC CCGGCGAAGA AGCCGGTTGC GCGCGGTCAT GCATCACGTG ACCGCGAAAT AATGACGTTC GCCGTGCGGT ATCCCCATTG CCTGCCGCAG TTGCAGGAGG CGGGGGCAGA CCTCGTGCTG GGTACCGAAT GGGCGCGGAC GTTATGGGAC AAGATCGAGC GTCATGGTGC CGAAGAGGTG GTCGACCACC TCTCGGAACG GGAAAAGACG TTCTGGATTC GCTGCCGCAC TGGCGAGGTA CCCCCTCTCG ACAATGAAGA GGGCGAACTC GCGGCTGTGC GGCATATGTT GGCCGACATG CAACTGAAGG TGCAGAGCGC GTCGTGCATG GCAGCGCTGC GCCAGCAGAT GGGCGGAGTG TCCGACCCGG CGGCAGACAT CGAACTGCTG CGGGCGTTGC AGGAAACGTT GGGGAGGTCC CATGAGTAA
|
Protein sequence | MKRRDGSVVQ AIKSRLNLVD IARRYVELRR AGGRWMAPCP FHQETKPSFS INEEEGFFYC FGCQASGDLF DFYGRINGLD FRETLEQLAE EAGVALDDWK PDPRAQQEQS LRRQCLRMYD VARAHFVGNL AKREGQECRD YMQRRAIAPE IIESFELGWS LREWQSLADT LRRAGFAQGL AVKAGLLATS DSGRAYDRFR GRLIFPIKSL AGQVIAFGGR IIAEDDQAKY INSSDSPIYK KGDHLYGLYQ ARRAISQHKV AMLTEGYMDV LTLHQFGYNN AVGVLGTALT PEQVKRLSGF CSTVELLFDG DNAGRKAALR SCEMLLVRGM RCKVVLLPQG EDIDSLLHGA GRDAFESIRN EAPDGLDFCM RSLAAQAPRD MLDWTKGFLA QVEQPELLSY YITRLAGGLG LNEAELRDSL AERVKAHAAA PAKKPVARGH ASRDREIMTF AVRYPHCLPQ LQEAGADLVL GTEWARTLWD KIERHGAEEV VDHLSEREKT FWIRCRTGEV PPLDNEEGEL AAVRHMLADM QLKVQSASCM AALRQQMGGV SDPAADIELL RALQETLGRS HE
|
| |