Gene Dvul_1369 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_1369 
Symbol 
ID4664794 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp1665915 
End bp1667633 
Gene Length1719 bp 
Protein Length572 aa 
Translation table11 
GC content61% 
IMG OID639819599 
ProductDNA primase 
Protein accessionYP_966814 
Protein GI120602414 
COG category[L] Replication, recombination and repair 
COG ID[COG0358] DNA primase (bacterial type) 
TIGRFAM ID[TIGR01391] DNA primase, catalytic core 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0240791 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.628544 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGCA GGGACGGTAG TGTCGTTCAG GCCATAAAGA GTCGGCTCAA TCTTGTCGAT 
ATCGCGAGAA GATATGTCGA GCTCAGAAGG GCAGGTGGTC GCTGGATGGC GCCCTGTCCT
TTCCATCAGG AGACGAAGCC TTCATTTTCG ATCAACGAGG AGGAGGGGTT CTTCTACTGT
TTTGGTTGTC AGGCGTCCGG TGACCTCTTC GATTTCTACG GGCGCATAAA CGGACTCGAC
TTTCGCGAGA CGCTTGAACA ACTCGCCGAA GAGGCGGGGG TGGCACTCGA CGACTGGAAG
CCCGACCCGC GGGCGCAGCA GGAACAGTCG CTGCGGCGGC AATGTCTGCG GATGTATGAC
GTGGCGCGTG CGCATTTCGT CGGCAACCTC GCGAAGCGGG AAGGGCAGGA ATGTCGCGAT
TATATGCAGC GGCGTGCCAT CGCCCCGGAA ATCATCGAGA GTTTCGAACT CGGCTGGAGT
CTGCGCGAAT GGCAGTCGCT GGCAGACACG TTGCGGCGTG CCGGTTTTGC GCAGGGGCTT
GCCGTCAAGG CGGGTCTGCT TGCCACCAGT GACAGCGGAA GAGCCTATGA CAGGTTTCGT
GGGCGATTGA TCTTTCCCAT AAAGAGTCTT GCCGGACAGG TCATCGCATT CGGCGGGCGT
ATCATCGCCG AGGATGATCA GGCCAAATAT ATCAACAGTA GCGATTCGCC CATCTACAAG
AAGGGCGACC ACCTGTACGG ACTGTATCAG GCGCGGCGCG CCATCTCGCA GCACAAGGTA
GCCATGCTGA CGGAAGGCTA CATGGACGTG CTCACCCTGC ACCAGTTCGG CTACAACAAC
GCCGTCGGGG TGCTTGGTAC GGCGCTCACG CCCGAGCAGG TGAAGCGGCT TTCGGGCTTC
TGTTCGACTG TGGAGTTGTT GTTCGACGGC GACAACGCAG GGCGCAAGGC GGCCTTGCGC
AGTTGCGAGA TGCTTCTGGT GCGCGGGATG CGTTGCAAGG TCGTTCTCCT GCCACAGGGA
GAGGACATCG ACAGCCTGTT GCACGGGGCC GGGCGTGATG CTTTCGAAAG CATACGGAAC
GAGGCCCCTG ATGGACTGGA TTTCTGCATG CGGAGTCTGG CGGCACAGGC CCCGCGAGAT
ATGCTTGACT GGACGAAGGG GTTTCTCGCG CAGGTCGAGC AGCCCGAATT GCTTTCGTAT
TACATAACGC GGCTTGCGGG CGGACTCGGC CTCAACGAGG CAGAGTTGCG TGACAGCCTT
GCCGAGCGCG TCAAAGCGCA CGCAGCCGCC CCGGCGAAGA AGCCGGTTGC GCGCGGTCAT
GCATCACGTG ACCGCGAAAT AATGACGTTC GCCGTGCGGT ATCCCCATTG CCTGCCGCAG
TTGCAGGAGG CGGGGGCAGA CCTCGTGCTG GGTACCGAAT GGGCGCGGAC GTTATGGGAC
AAGATCGAGC GTCATGGTGC CGAAGAGGTG GTCGACCACC TCTCGGAACG GGAAAAGACG
TTCTGGATTC GCTGCCGCAC TGGCGAGGTA CCCCCTCTCG ACAATGAAGA GGGCGAACTC
GCGGCTGTGC GGCATATGTT GGCCGACATG CAACTGAAGG TGCAGAGCGC GTCGTGCATG
GCAGCGCTGC GCCAGCAGAT GGGCGGAGTG TCCGACCCGG CGGCAGACAT CGAACTGCTG
CGGGCGTTGC AGGAAACGTT GGGGAGGTCC CATGAGTAA
 
Protein sequence
MKRRDGSVVQ AIKSRLNLVD IARRYVELRR AGGRWMAPCP FHQETKPSFS INEEEGFFYC 
FGCQASGDLF DFYGRINGLD FRETLEQLAE EAGVALDDWK PDPRAQQEQS LRRQCLRMYD
VARAHFVGNL AKREGQECRD YMQRRAIAPE IIESFELGWS LREWQSLADT LRRAGFAQGL
AVKAGLLATS DSGRAYDRFR GRLIFPIKSL AGQVIAFGGR IIAEDDQAKY INSSDSPIYK
KGDHLYGLYQ ARRAISQHKV AMLTEGYMDV LTLHQFGYNN AVGVLGTALT PEQVKRLSGF
CSTVELLFDG DNAGRKAALR SCEMLLVRGM RCKVVLLPQG EDIDSLLHGA GRDAFESIRN
EAPDGLDFCM RSLAAQAPRD MLDWTKGFLA QVEQPELLSY YITRLAGGLG LNEAELRDSL
AERVKAHAAA PAKKPVARGH ASRDREIMTF AVRYPHCLPQ LQEAGADLVL GTEWARTLWD
KIERHGAEEV VDHLSEREKT FWIRCRTGEV PPLDNEEGEL AAVRHMLADM QLKVQSASCM
AALRQQMGGV SDPAADIELL RALQETLGRS HE