| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_1342 |
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| Symbol | secF |
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| ID | 4664468 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris DP4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008751 |
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| Strand | + |
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| Start bp | 1637114 |
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| End bp | 1638202 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639819572 |
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| Product | preprotein translocase subunit SecF |
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| Protein accession | YP_966787 |
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| Protein GI | 120602387 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0507667 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.548062 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGACTTT CATTCATCAA ATATGACACG AAGATAGACT TCGTGGGCAT GCGCCGCATC
GCCTACGTGC TCTCGATCGT CGTCATTCTC ATCGGCTTCG CCTCCATCGC CATGAATGGC
GGACTCCGCT ACGGTATCGA CTTTGCTGGC GGTGCCGTGG TGCAGGTCAA GTTCGACAAG
CCGGTCGAAG ACGAGGCCAT CAAGAAGAGT CTCGCCGACG CCGACCTGCC GGGGCTTTCC
ATCCAGCGTT TCGGTGAGGG TGACGAAGAC TATCTCATCC GCATCTCCGA TACCGGGTCG
TCTGCTGACA GCATCCGCCA GACCGTGTCG ACCGCGTTGC AACAGAACCT CAAGGACGTG
TCCTTCACGG TGCAGCGGCT TGAGATGGTC GGCCCCAAGG TCGGGGCGGA CCTGCGCAGC
AAGGCCGTCG AGGCCCTGTA CTATGCCGTG TTGCTCATTG CCGTGTACAT CTCCGGTCGT
TTCGAACAGC GATGGATGGC CTCTGCGGTG ATGGCGGCAA CCCTCTGGGG TGGCATGTAC
CTGTTGTCGG CCATAGGGCT TGGACGTGAA TGGCTGGTGT TCGTCTCCCT GCTGGTGACC
GTAGCTCTGT GCTGGAAGTT GAAGCTCAAC TTCGCGCTGG GTGCCATCAT AGCACTGTTG
CACGACGTGC TCATCTCCAT CGGTCTGCTG TCGCTTCTCG GCAAGGAGTT CGACCTGAAC
ATCATCGCCG CGCTGCTGAC ACTCATCGGC TACTCGCTGA ACGACACCAT CATCGTCTAC
GACCGTATCC GCGAGACGCT CCGCACGAAC CCGGATGACC CGTTCGACGT CATCATCAAC
CGCAGCATCA ACCAGACCCT CAGCCGTACC ATTCTCACCG GTGGCACGAC GCTGATGGTC
ATCGTCAGCC TGTTCTTCCT CGGCGGTGGC GTCATCCATG ACTTCGCCCT GACGATGTTC
TTCGGCGTGT TCATCGGAAC GCTGTCGTCC ATCTTCGTGG CAAGCCCGGT GCTTCTCGCC
TTCGGCAAGC CGGTCATGGC CGCTGTCGAT GCCGACTACG AAAAGCCCGG AGAGCATGGC
GTCGTCTAG
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| Protein sequence | MGLSFIKYDT KIDFVGMRRI AYVLSIVVIL IGFASIAMNG GLRYGIDFAG GAVVQVKFDK
PVEDEAIKKS LADADLPGLS IQRFGEGDED YLIRISDTGS SADSIRQTVS TALQQNLKDV
SFTVQRLEMV GPKVGADLRS KAVEALYYAV LLIAVYISGR FEQRWMASAV MAATLWGGMY
LLSAIGLGRE WLVFVSLLVT VALCWKLKLN FALGAIIALL HDVLISIGLL SLLGKEFDLN
IIAALLTLIG YSLNDTIIVY DRIRETLRTN PDDPFDVIIN RSINQTLSRT ILTGGTTLMV
IVSLFFLGGG VIHDFALTMF FGVFIGTLSS IFVASPVLLA FGKPVMAAVD ADYEKPGEHG
VV
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