Gene Dvul_1335 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_1335 
Symbol 
ID4664580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp1628620 
End bp1629948 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content65% 
IMG OID639819565 
Productamidohydrolase 
Protein accessionYP_966780 
Protein GI120602380 
COG category[F] Nucleotide transport and metabolism
[R] General function prediction only 
COG ID[COG0402] Cytosine deaminase and related metal-dependent hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.419453 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCTTC CCTGTGACAC TATCCTGCAA GCTGCCCTCA TTGTCACCCA GGACGACGCC 
CGCACGGTCA TCGAAGACGG TGCCATAGCC ATACACGAAG GACGGATTGC AGCCGTCGGG
CAACGTGATG CGATCGTCGG CAACTGGCAT GGCGCAACCG TCATCGACAT GGGCGCGAGC
CTCATCATGC CCGGTCTCGT CAATGCGCAT ACGCATGCGT CCATGACACT TCTGCGCGGT
CTTGCCGACG ACCTTCCCCT CATGGACTGG CTCACGGGCC ATATCTTTCC CGTGGAAAAA
GGGCTGACAG GGGAACTGGT CGAACTGGGA GCCTTGCTAG GCTGTGCGGA GATGCTGCGG
ACGGGAACGA CGGCCTTCAG CGACATGTAC CTCATCGAAG ACGCCACGCT GCGTGCGGTC
GACCGCGCCG GACTGCGCTG CCTCGCCGGT GAAGCCATCT TCGCCTTCCC CTCGCCCGCC
TACGCAGACC CGGAGACGGC CTTCGACCTC GTCCGTGCCC AGCACGACCG CTGGAAGCAC
CATGCCCGCG CGGCGTTGGC TGTGGCTCCT CACGCAGTCT ACACCAGCAC ACCTGCGATA
CTCGCCCGCT GCCGCGACCT CGCCGAAGAG CTTGGCCTGC CGATACACCT GCACCTTGCG
GAAACCGCCA CCGAGACGGC GCAATGCATC GAACAGCACG GGGCACGCCC CGTGCCCTAT
TGCGACGGAC TGGGGTTGCT CACGCCCCGC ACGACACTGG CCCATTGCGT CGACCTCACC
GAAGGGGAGA TTGACCTGCT GGCAGAACGC GGTGTCACCG TGGCGCACTG CCCTGAGAGC
AACATGAAGC TCGCCTCCGG CATCGCACCG GCCACGGCCA TGCTTGGGCG GGGCATGACG
CTTGGACTTG GGACCGACGG GGCAGCCAGC AACAACAGCC TGAACATGTT CACCGAAATG
ACCTCATGCG CGTTGCTGCA CAAAGTGCAT CACATGGACC CCACCTGCGC TCCCGCCTCC
GCCGTCCTTG ACATGGCCAC ACGTGGCGGG GCACATGCCC TGCACATGCA GGGAATAGGA
CGCATCGAAG CCGGGTGCCC AGCCGACATC ATAGCCCTCG ACCTGCGCGC CCCCAACATG
CAGCCCATCT TCAACCCGGC ATCGCACCTC GTCTACGCGG CGACGGGCCA CGAGACCCGA
CTGGCCATGG TCGGCGGGGA GGTGCTCTAC CTCGATGGAT GCTACACCCG CTTCGACATG
GACGACCTGC TGAAGGAAGT GCGCAAGGCC CGCACATGGG CCATGGAACA GGTACGCGCA
GCGCGGTAG
 
Protein sequence
MPLPCDTILQ AALIVTQDDA RTVIEDGAIA IHEGRIAAVG QRDAIVGNWH GATVIDMGAS 
LIMPGLVNAH THASMTLLRG LADDLPLMDW LTGHIFPVEK GLTGELVELG ALLGCAEMLR
TGTTAFSDMY LIEDATLRAV DRAGLRCLAG EAIFAFPSPA YADPETAFDL VRAQHDRWKH
HARAALAVAP HAVYTSTPAI LARCRDLAEE LGLPIHLHLA ETATETAQCI EQHGARPVPY
CDGLGLLTPR TTLAHCVDLT EGEIDLLAER GVTVAHCPES NMKLASGIAP ATAMLGRGMT
LGLGTDGAAS NNSLNMFTEM TSCALLHKVH HMDPTCAPAS AVLDMATRGG AHALHMQGIG
RIEAGCPADI IALDLRAPNM QPIFNPASHL VYAATGHETR LAMVGGEVLY LDGCYTRFDM
DDLLKEVRKA RTWAMEQVRA AR