| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_1219 |
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| Symbol | |
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| ID | 4664529 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris DP4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008751 |
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| Strand | + |
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| Start bp | 1497522 |
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| End bp | 1499111 |
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| Gene Length | 1590 bp |
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| Protein Length | 529 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639819451 |
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| Product | NifA subfamily transcriptional regulator |
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| Protein accession | YP_966666 |
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| Protein GI | 120602266 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
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| TIGRFAM ID | [TIGR01817] Nif-specific regulatory protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.832328 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.664037 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAAT CGATCCAGAC CGACGACAGG CGTCTGCAAC CCTATCTGGG AACGCTTCAG
AAGATCGTAT CGGAGATGGG CCCGCAACGG CCCTTCCAGT CGACCCTGAA GTCGTTGCTG
CACACCCTTG CCGAGAACCA CGATTTCAAG CGTCCGCACA TCGTCATCTT CGACCCTGAG
ACGCGGACGC TGAAGTTGAG CCTCACCGAT ACCCCTGCCA AGGCACAGAA TGCCGAGTAT
GAGCCCGGTG TCGGTGTCAC GGGGCAGGTG TTCGCCTCGG GCCAGCCTGT CGTCGTGCCC
TGCATGAAGG AGCATCCGGC GTTCCTGAAC AAGATGTTCG GCCGTTCCGA AGAGGAGTTG
GCGACGTTGG CGTTCATCTG CGTCCCCGTG CTCGGCCCCA GCGACGAACC TCGCGAAGGG
CGCGAAGTCA TCGGCACACT GAGTGTGGAT ACGCCCAACA CGTCGCACGC GCAGCTTGAG
GCGCATTGCC GTTTCCTTGA AGTTGTGGCG GGTATGATCG CCAACCATGC CGCCTACATG
CAAGAGGAGA TGGCGCGCCA GAAGCACCTC ATGACGCAGG GGCTCATCGT CGGTGATACG
GGCGAGGGTA CGTTCAACCC CGCCAATATC GTCGTGGCGT CCAAGACCAT GCGGCTGGTG
CTCAATCAGG CTGCGCAGGT CGGGCCCAGC AGGGCCACCG CGCTTCTGCG CGGTGAGTCG
GGCACAGGCA AGGAGCTTCT GGCCGAGGCC ATTCATCAGG CCAGCCCCCG TCGTGATATG
CCGCTCATCA AGCTCAATTG CGCGGCCCTT CCTTCGGAAC TGGTCGAGAG TGAGCTCTTC
GGCTACCAGA AGGGGGCGTT CACCGGGGCG ATACAGACCA AGAAGGGCCT GTTCGAACTG
GCGCACAAGG GTACGCTCTT CCTTGATGAG GTTGGCGAAC TCAGTCCCTC GGCGCAGGCG
AAGGTGTTGC GTGCCATTCA GGAGCAGGAG ATTCAGCGTC TCGGCAGCGA GCAGACCATC
CTTGTCGACG TGCGCCTCAT CTGCGCCACG CACCAGCCTC TGGAAGAACT GGTGGAGAAG
GGGCTGTTCC GCGAAGACCT CTACTATCGC ATCAACGTCT TCCCCATCTT CATACCGCCC
CTGCGTGAGC GGCGTGAAGA CATCCTGCCC ATCGCCGAGC ACTTCTTGCG CATGTACGCG
GAAGAATACT CGAAGAGCAT CAAGCGCATC TCGACGCCTG CCATCGACCT GCTGACGCAG
TACCACTGGC CCGGCAACAT CCGGGAACTC AAGAACTGCA TCGAACGGGC GGTGCTGGTG
TGCGACGAAC AGGTCATCCG CACCTACCAT ATGCCACCTT CGTTGCAGAC AGCCGAAAGC
ACGGCCACAG ACACCAATCT CTCATTCTGC GAGGCTGTGG CCAAGTTCGA GCAAGAGCTT
CTGGTGGATG CGCTCAAGAA GGCCCGCGGC AACATGTTGC AGGCGGCACG CGACTTGCGC
GTCAGCTACC GTATCGTGAA CTACAAGGTG AAGAAGTACG GTCTCGATGC CAAGAAGTTC
GCCGTGGCGA AGGCGCGCGG CATGAAATAG
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| Protein sequence | MTQSIQTDDR RLQPYLGTLQ KIVSEMGPQR PFQSTLKSLL HTLAENHDFK RPHIVIFDPE
TRTLKLSLTD TPAKAQNAEY EPGVGVTGQV FASGQPVVVP CMKEHPAFLN KMFGRSEEEL
ATLAFICVPV LGPSDEPREG REVIGTLSVD TPNTSHAQLE AHCRFLEVVA GMIANHAAYM
QEEMARQKHL MTQGLIVGDT GEGTFNPANI VVASKTMRLV LNQAAQVGPS RATALLRGES
GTGKELLAEA IHQASPRRDM PLIKLNCAAL PSELVESELF GYQKGAFTGA IQTKKGLFEL
AHKGTLFLDE VGELSPSAQA KVLRAIQEQE IQRLGSEQTI LVDVRLICAT HQPLEELVEK
GLFREDLYYR INVFPIFIPP LRERREDILP IAEHFLRMYA EEYSKSIKRI STPAIDLLTQ
YHWPGNIREL KNCIERAVLV CDEQVIRTYH MPPSLQTAES TATDTNLSFC EAVAKFEQEL
LVDALKKARG NMLQAARDLR VSYRIVNYKV KKYGLDAKKF AVAKARGMK
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