| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_1210 |
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| Symbol | |
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| ID | 4662582 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris DP4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008751 |
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| Strand | - |
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| Start bp | 1484475 |
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| End bp | 1486868 |
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| Gene Length | 2394 bp |
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| Protein Length | 797 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639819442 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_966657 |
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| Protein GI | 120602257 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.489928 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTATCC GCGAAGCATT ATTGGATGTC CTGAAAGGGC TGTTAAAGAC GACACCACGC
GAAGAACCTC TGGCCGACAC GTCGGTGACA GAAGAAGGAA GGTCACGGAC GCAGCGCCCC
GGCACCATGA GGCAACCGTG GGAAGAATCG CCTCTTGAGA TGTTACGGGC ATATGACGCG
CTGCATATCG TCGTGCTTCG CCTTGTCGAC CACGCCCTGC TGCATGAACT CTACGGCAGT
GAGCTTCTTT CGGGTGTCGA ACGCAGCATC GCCGCAAGCA TTGGTGAACA TCTGCCACAA
TTGGGGCATC TCCCGGATGG CACGTTGCAA CTCTTTCCAG CGGAAGGTGG CGAATTCGTG
GCTGTCTGGC CCGCACAGCG CCAGCGCACG AGACGCCTCG CCGACATCGC CTACACGCTC
AAGCACTCCG TCCGCCATGC CGTGAAAGAC AGCCCGCTGC TGTGGTCGGG CCGCGACCTC
CAGATAGACA CGGGTTGCGC CGTCTTCCGC AAACGTCCGG ACAGGCCGGT CGAAGATGAC
TTTCTGCGTT CGCTAGACGA TGCGCGCATG ATGGCCCACC GCAACATGGA CCTCACCGAC
CTGCGCATGG CCCGTGACTT CAAGACGATA CTTCAGGAGA ACGCCTTGCG CACACTCTAC
CAGCCCATCG TCCACTTCCC CACGGGTCGC ATCATGGCCT GGGAGGCTCT CACCCGTGGG
CCTGCCGATT CGCCCCTGCA TTCTCCGGCC ATGCTCTTCG ACGTGGCCGA GGAGATGGGT
ATGCTCTTCG CCCTTGAGCG CAATTGCCGC GAACGTGCCA TCGCCGATGC CGGGACACTG
GCCGCAGGGC AGAAGCTCTT TCTCAACATC CACCCCCGCA CGTTGTCCGA CCCCGAGTTC
ACACCGGGCA GCACACTCCG TGCGTTACGT GACACGGGGT TGCGTCCCGA GGATGTCGTC
TTCGAAATCA CCGAACGACA CGCCATCAAA GACCTGACCA CGTTCTACAA GACGCTGGAG
CATTATCGCG GGCAGGGATT CGGCATCGCC ATCGACGACG CAGGCACAGG CTATTCCGGC
CTCGCCAGCA TCGCCGAACT CAAACCCGAC TTCATCAAGA TAGACATGTC GCTGGTGCGA
GGCATCCATC GCGACCCCGT CCGTCAGGCT CTCATCGAGA CGTTCATCGA CTTTGCGGAG
AAAATCGGCG CACGGGTCAT CGCGGAGGGC ATCGAGTGCA GAGAAGAGGC GAGCATCCTG
CTGCGGATGG GGGCGCACTA CGGGCAAGGG TACTACCTTG GGCGACCGTC GTACCCGAAG
CACGAGGAGT ACATCGACCT CAGCGGACTG CGCCCCGCGC TGGATATCGG AACATCGGGC
ATGGCGTGTT CCATGCCTGT GGGCGACCTT GCCGAGGAGG CACAGACCGT CGCGCCCGAC
GCCCTCGTCG ACGACATCCG CAAGCGCTTC GAGGACGGAC AGCAGCATAA CGGACTTGCC
GTGGTCGACG CCAACACCCA CCCCATGGGT CTGGTGATGG ACTACCACCT GAACCGCCAG
CTTTCGGCGC AGTACGGAGT CGCTCTCTAT TCCAGAAGGG CTGTCACGTG CGTCATGGAC
CCCGCACCGA CCATCCTCGA CGAGAGTACC CCTGCCGAAG AGGCCGCACG CATCGCCATG
GCCCGCCCCC GGCTTCAGGC CTATGACGAC CTTCTGGTCA CACGCGAGGG AAGACTCACC
GGTATCGTCC CCGTCCAGAA ACTGCTGCAC ACCATCGCAG AGGTGCAGGT CGAACTTGCA
AAGGGCACGA ACCCCCTTTC GGGGCTTCCC GGCAACGTCG CCATCGAGAA GGAGATAGAG
ACGCGGCTCG CCTCGGCACG GCGTTTCGCA CTCATCTACG CCGACCTCGA CAACTTCAAG
AGCTACAACG ACACCTACGG ATTCAAGAAC GGGGACCGCA TCATCCTGCT ACTGGCGCGC
ATTCTCGCAT GGGCCATACG GCGGCACGGG AGGAAGGGCG ACCTTGTAGG GCACATCGGC
GGCGACGACT TCGTGTGCAT CACCACACCC GAACTCGCAT CCCGGGTCTG CAAGGGCATA
ACCCGTTGTT TCGGCAGGCT CGTCCGCCAC TGCTATTCTG CCGAAGACAG AGAGCGGGGC
TGGATAATGG CGCGAGGGCG TGATGGCGTG GAACGGAACT TCCCCCTCGT TTCGGTCTCA
CTGGCTGTGC TCGACTGCGG TATGGAGAAC AACCTTCTGG AAATCGGAGA ACGGGCGGCC
CATGTGAAAC ACCTGGCGAA AGCCATCGCG GGCAACGCCT ACGTCCTCGA GACCGGGAAC
GTAGGCGGAA GCGGAGACTG CGTATGCCGC AGTGGTACGC AAAGTGCGTT TTGA
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| Protein sequence | MRIREALLDV LKGLLKTTPR EEPLADTSVT EEGRSRTQRP GTMRQPWEES PLEMLRAYDA
LHIVVLRLVD HALLHELYGS ELLSGVERSI AASIGEHLPQ LGHLPDGTLQ LFPAEGGEFV
AVWPAQRQRT RRLADIAYTL KHSVRHAVKD SPLLWSGRDL QIDTGCAVFR KRPDRPVEDD
FLRSLDDARM MAHRNMDLTD LRMARDFKTI LQENALRTLY QPIVHFPTGR IMAWEALTRG
PADSPLHSPA MLFDVAEEMG MLFALERNCR ERAIADAGTL AAGQKLFLNI HPRTLSDPEF
TPGSTLRALR DTGLRPEDVV FEITERHAIK DLTTFYKTLE HYRGQGFGIA IDDAGTGYSG
LASIAELKPD FIKIDMSLVR GIHRDPVRQA LIETFIDFAE KIGARVIAEG IECREEASIL
LRMGAHYGQG YYLGRPSYPK HEEYIDLSGL RPALDIGTSG MACSMPVGDL AEEAQTVAPD
ALVDDIRKRF EDGQQHNGLA VVDANTHPMG LVMDYHLNRQ LSAQYGVALY SRRAVTCVMD
PAPTILDEST PAEEAARIAM ARPRLQAYDD LLVTREGRLT GIVPVQKLLH TIAEVQVELA
KGTNPLSGLP GNVAIEKEIE TRLASARRFA LIYADLDNFK SYNDTYGFKN GDRIILLLAR
ILAWAIRRHG RKGDLVGHIG GDDFVCITTP ELASRVCKGI TRCFGRLVRH CYSAEDRERG
WIMARGRDGV ERNFPLVSVS LAVLDCGMEN NLLEIGERAA HVKHLAKAIA GNAYVLETGN
VGGSGDCVCR SGTQSAF
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