Gene Dvul_1194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_1194 
Symbol 
ID4664550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp1465660 
End bp1466982 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content61% 
IMG OID639819426 
ProductNa+/H+ antiporter NhaC 
Protein accessionYP_966641 
Protein GI120602241 
COG category[C] Energy production and conversion 
COG ID[COG1757] Na+/H+ antiporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.453429 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00097014 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGAACAGA AAACCAACGG GCTGGCGTTG CTGCCGCTTG CGCTTTTTCT CGTACTCTTC 
ATCGGGACTG GCAGCATTCT GAGTTTCACT GGCGTGAAGA TGGCCTTCTA TGAGCTTTCG
CCCGCTGTCG CCATCCTTCC CGCGCTCGCA CTCGCCCTCA TCATGGGGCA TGGTGGCTTG
TCGAAGAAGA TCAACATCAT GCTTGCAGGT GCCGGTGAGA TCAACATCAT CACCATGTGC
GTCATCTACC TGCTGGCTGG TGGTTTTGCC AGTGTCGCCA AGGCCATCGG CGGGGTCGAC
GCCACGGTGA ACCTCGGCCT GTCGCTCATT CCTGCCGAGT TCATTCTGCC CGGTCTCTTT
CTCATCGCCG CCTTCGTATC CACCGCCATG GGCACCTCCA TGGGAACCAT CGCCGCCGTA
GGACCCATTG CTGTGGGCAT CGGGCAGCAG ACCGACATCG GGCTTGCCAT GCTCATGGGC
TCTGTAGTCG GTGGTGCCAT GTTCGGCGAC AACCTTTCGA TGATATCCGA TACGACCATC
GCCGCTACGC GGACGCAAGG GTGCGAGATG GGTGACAAGT TCCGCATGAA CCTGCTCATC
GCACTGCCTG CCGCCGTGGG TGCTACGCTC CTTTTCTGGC TCATGGGCGA CAGCGGTCAG
GCTGCACGTG TCGGGGCATG GGAGATGGCG CGCGTTCTGC CGTACGTGGT CATTCTTGCC
ATGGCGCTGG CGGGCATGAA CGTCTTCGTG GTGCTCTTCA CGGGCATCGT GCTTGCCGGG
GGCGTTGGCG TGGCTGTCGT GCCGGGGTAT TCGGTGCTGC AATGGGCCAA GGACATCTAT
GCAGGTTTTT CGGGGATGCA CGAGATTCTC GTCCTCTCCA TGCTCATGGG CGGACTCGGT
GAGCTTATCC GGTATCAGGG CGGGCTTGCT TGGCTTCTTG AGCGTATCGG TCGCATGACC
AGCGACAGGC GAGACGGTCG CACCCGTCGT CTCGGAGAGG CGGGTATTTC GCTGCTGGTG
AGTCTTGCCA ACCTCTGCAC GGCCAACAAC ACCGTTGCCA TTATACTCAC AGGGGGAATG
GCACGCGGGC TTGCCGAAAC CAACGGTGTC GACCCGCGGC GCAGTGCCAG TATGCTCGAC
ATCTTTTCGT GCGTGGTGCA GGGGCTCATT CCCTTCGGTG CTCAGGTGCT GCTTGCCGGG
TCGATAGCTG GCATCTCCCC TGTGGATGTG TCGCTGTCGA ACATGTACTG CTATCTGCTG
TGCGTGGCTG CACTCGCGTC CATCGCCCTC GGGTTGCCCA AGGGGGGCCG GAAGGTCGCC
TGA
 
Protein sequence
MEQKTNGLAL LPLALFLVLF IGTGSILSFT GVKMAFYELS PAVAILPALA LALIMGHGGL 
SKKINIMLAG AGEINIITMC VIYLLAGGFA SVAKAIGGVD ATVNLGLSLI PAEFILPGLF
LIAAFVSTAM GTSMGTIAAV GPIAVGIGQQ TDIGLAMLMG SVVGGAMFGD NLSMISDTTI
AATRTQGCEM GDKFRMNLLI ALPAAVGATL LFWLMGDSGQ AARVGAWEMA RVLPYVVILA
MALAGMNVFV VLFTGIVLAG GVGVAVVPGY SVLQWAKDIY AGFSGMHEIL VLSMLMGGLG
ELIRYQGGLA WLLERIGRMT SDRRDGRTRR LGEAGISLLV SLANLCTANN TVAIILTGGM
ARGLAETNGV DPRRSASMLD IFSCVVQGLI PFGAQVLLAG SIAGISPVDV SLSNMYCYLL
CVAALASIAL GLPKGGRKVA