Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dvul_1166 |
Symbol | |
ID | 4663531 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris DP4 |
Kingdom | Bacteria |
Replicon accession | NC_008751 |
Strand | - |
Start bp | 1425038 |
End bp | 1428496 |
Gene Length | 3459 bp |
Protein Length | 1152 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639819396 |
Product | UvrD/REP helicase |
Protein accession | YP_966613 |
Protein GI | 120602213 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.638752 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGAGA ATCCGCAACT GCTTCAGATA AAGGCATCCG CCGGGTCGGG GAAGACATAC ACCCTTACCC GGCGGTTCCT CGAATTGCTA GGCACAGCGC AACAGGACGG TTCCACCGGC CCTGCCTGCA CCCTCTCCGC CGATGGTCGG CATTGCTGGC CAGAGATACT TGCCGCCACC TTCACCAACC GCGCCGCCAC GGAGATGAAG GAACGGGTGG TGCGGCGACT CAAGGAGATG GCACTGCGAA CCGGCGAGTC GCCCGAAGCC CCGTGGACGC CAGCCCTTGC GGACCGATGG GTGGGGACGA TACTGCGACA GTACGGTGCC CTGAACATAC GTACCATCGA CAGCCTTCTC ACCCTGCTGG TGCGTCTCTC GGCCCTCGAC CTCCGCCTGC CGCCCGACTT CGAACCGGCC TTCGCAGGCC CGGACTTCTT CGAACCGCTT CTCGACGATG TGCTGGAAAC GGCCCGCCAC GACGACCCCG CCCTGCGCGA CATGCTTCGC CGTGCCTGCG AGACCCTCAT CCACCATACG GACCACAAGG GCTTCGCCAC CGGCGAGAAG CTGCGGGCAC GGCTTCTTGA GCTTCTGGAA TGGCATCTTT GCAACGGCGA CCTGCCGACG ACGGATGCAG ACACCGTGCG TGCCCACCTT GTCACGCTGC ATGAACGGGC ACGGCAGGGT GCGACGACCC TCACGCGCGT GACGGCCGAC GAGAACCTCG CCGTGGCGGC GAACTTCCTG AAGTTCCTCG TCAAAGTCGA AGAATCGTCA CCGTTCGCCA AAGTCCCCGA ATCGGCCTAT CTCCATAAGA CGAACCTCGA CGAGTGCCTC AACAAGGCTT CGCGCGGCAA CGCCTCCGCA CAAGCGGAGA GTGCCTTCTC GGCGTTCATG GCCGCCCTCG CCGCCTTCCG CACACGCGGA AGGCTTCTGC AACGCGCCCT CGCCATCATG CCCCTTGTGG GCATTGCCGA AACGCTGGCC CGCAGGCTGC CCGACTATCA ACTGCGCGAG GGAAAGGTCC CCGCGCAATT GCTGCCCCAG ATGGCGCGCC GGGTGCTCGA TGGCGAATAC GGGGTCTCCG AGGCGTTCTG CCGCATGGGC ACACGGCTGG CGCACATCCT CGTCGACGAA TTCCAGGATA CCAGCAAGGA CCAGTGGGCA GCCATCCAGC CCCTTGCCGT CGAGTGCCTG TCGCGCGGGG GCAGTCTCAC ATGGGTAGGA GACGTCAAAC AGGCCATCTA CGGCTGGCGC GGTGGAGATT CCGCCCTGTT CGACGCCGTC CTGCGGGATG GCGAACTTCT GGCCATCGCC GGAGACGGCA TCTCCGGCAC GCTGCCGCGC AACTGGCGCA GCCGCCCCGA AATCGTCCAC TTCAACAACG ACGTCTTCGC CCTTCTGGGC GACGAGGCCC ACGCTACGAC TGTGCTGCGC GCCATGCTGC CGGAGGGCAC CCCGCCCGAC GTCTTCAGTG AAGCCGTCGA TGAGCTTGCG CGGGCCTTCA CCGGGGCCGC GCAGGAGACG CCCCCCCGTG GGGACGACGA GTCACAAGAA GAAGGCTTCG TGCGCCTCAC GCACGTCGCG GCATTCGACA GTGAAGAACT CGATGCCGAG GTCAAGACGA CCCTTCGGTC GCTCTTCATG GGCGACCTCG CCCTCCGCCG CCGCTGGCGC GACGTGGCTG TGCTGGTGCG TACCAACGGA GAGGCGGGCC GCGTCGCCAC GTGGCTCATG GAGTGGGACA TCCCCGTCGT CACCGAGAAC AGCCTGCGAC TGGCCGACCA TCCGCTGATT TCGCAGACTG TGGCGCTTCT GGGCTTTCTC GACTACCCGC GTGACGACCT CGCCTTCTGG GAATTCGCCG CAGGGCCCGA ACTCCTGGGC GATGCAGCGG GGCTTGACGC CCCCGCCATG GACGACTGGC TGGCAGAGGG CGGGCGCGGC CCGCTGTTCA CACGCTTTCG TGACGCCTTT CCCGCCGTCT GGCGGCGCTG GATAGCCCCG TTCTACAGCC GTGCCGGACT CATGAGCGTG TATGACACGG TACGCGAAGT CTACACCCGC TTCCGGGTCT TCGACCGCTA CCCGGAGGAC GCCGGATTCC TCCGCCGTTT CCTCGAAGTC GTGCATGCCG CCGAAGGACA AGGCCTTGTC TCGCTTTCGA CCTTTCTCGA CTTCTGGAAA CGCACCGGCG GGGACGAGAA GGTGCCCATG CCGGAAGGGA TGGACGCCGT GCGCGTCATG ACCATGCACA AGGCCAAGGG GCTGGAGTTT CCCGTGGTGG TCATCCCCTT CCACCATCAG GCGGACAGGG CCGACGACAC TCCCGTCCGG ATGGAAGTCG AAGGACTCGA CCTGCTCGTG CCTCGCTGCC CGGAGATGGG AAAGCCCTAC TACGAGGCCT TCGCAGCTTC GGTACGTGAG CAGCTGCACG TGCTCTATGT GGCATGGACG CGCCCCGTCG AAGAACTGCA CGCCTTCATC ACCGAAAGGA AGACAGGAAA GGGCAGGTCT GCCCTGCTTG AAGGGCTCAA GGTACTGCTC GGTCTTTGCG GCGTGCCCGA AACGTGGGGC ACATGGGAAC GGGGCACGAT TCCGGCATCT GCCCTCGCCG ACTCGACGAC GGAGACCATG CCTGAAGGGA GACCAGACCA GCCCGAATCG ACGCCACATG CCATGGCATC TCCGACGCTG GCGGATTCTG CCCCTGCGGA CGCTGCCCCT GTCGTGCTGG CACCGGCAGC GCAAACGGTA CCACCCCCGC AACCTGCTGC GTCTGCCTGC GCTTCGGAGA CCGCCCCGCA AGCCACAGGG CATGACACCC CGTCGCTCAT GGTGGACGCA GCGGCATCCA TACCCGCCCC GGCATCGACA CCGGATGACG ACTGGCGCCC CATGCAATGG CTGCCCCGTC TGAAGATCTT CCGCAACCAG CTAGAAGAGT TCACCTTCAC CGAACGCAGG CGCGGCATGC TCGTCCATGC GTGTCTTGAG GCGCTGCACC CCACAGGCGC CCCGCGAGAG GACGCCGCCC GCGCCGTGCG CCATGGCATA AGGGCCTTTC CGTTGCCCGT CCCCGATGAG GACGCCGTGG CGGCGGAATT GACCACCATG CTGGAATGGT ATGCCGCGCA GCCTGAAACG GCGCACTGGC TACGCCACGG CACGCCAGAA CAGGGCATCC TCGACGCTCA GGGCAGGCTG CACCGCACCG ACCTCTTTGT CGATGACGGC AACGTGCGCG TCGTCGTCGA ATACAAGACC GGAGCCCCTT CGCCCGACCA CATCGAGCAG GTGCACCGCT ATCTCTCGCT GCTTCTGGAT GCCGACCCCC GCCCCGTCCA CGGCGTACTC GTCTACCTCG ACCGCCGCAC AACGCAGCGC ATCGACCCCG CCGAGTCCGG TGACACCAGC AACACCATCG CCCACCCCGC CGAGGCCCGC CGACCATGA
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Protein sequence | MIENPQLLQI KASAGSGKTY TLTRRFLELL GTAQQDGSTG PACTLSADGR HCWPEILAAT FTNRAATEMK ERVVRRLKEM ALRTGESPEA PWTPALADRW VGTILRQYGA LNIRTIDSLL TLLVRLSALD LRLPPDFEPA FAGPDFFEPL LDDVLETARH DDPALRDMLR RACETLIHHT DHKGFATGEK LRARLLELLE WHLCNGDLPT TDADTVRAHL VTLHERARQG ATTLTRVTAD ENLAVAANFL KFLVKVEESS PFAKVPESAY LHKTNLDECL NKASRGNASA QAESAFSAFM AALAAFRTRG RLLQRALAIM PLVGIAETLA RRLPDYQLRE GKVPAQLLPQ MARRVLDGEY GVSEAFCRMG TRLAHILVDE FQDTSKDQWA AIQPLAVECL SRGGSLTWVG DVKQAIYGWR GGDSALFDAV LRDGELLAIA GDGISGTLPR NWRSRPEIVH FNNDVFALLG DEAHATTVLR AMLPEGTPPD VFSEAVDELA RAFTGAAQET PPRGDDESQE EGFVRLTHVA AFDSEELDAE VKTTLRSLFM GDLALRRRWR DVAVLVRTNG EAGRVATWLM EWDIPVVTEN SLRLADHPLI SQTVALLGFL DYPRDDLAFW EFAAGPELLG DAAGLDAPAM DDWLAEGGRG PLFTRFRDAF PAVWRRWIAP FYSRAGLMSV YDTVREVYTR FRVFDRYPED AGFLRRFLEV VHAAEGQGLV SLSTFLDFWK RTGGDEKVPM PEGMDAVRVM TMHKAKGLEF PVVVIPFHHQ ADRADDTPVR MEVEGLDLLV PRCPEMGKPY YEAFAASVRE QLHVLYVAWT RPVEELHAFI TERKTGKGRS ALLEGLKVLL GLCGVPETWG TWERGTIPAS ALADSTTETM PEGRPDQPES TPHAMASPTL ADSAPADAAP VVLAPAAQTV PPPQPAASAC ASETAPQATG HDTPSLMVDA AASIPAPAST PDDDWRPMQW LPRLKIFRNQ LEEFTFTERR RGMLVHACLE ALHPTGAPRE DAARAVRHGI RAFPLPVPDE DAVAAELTTM LEWYAAQPET AHWLRHGTPE QGILDAQGRL HRTDLFVDDG NVRVVVEYKT GAPSPDHIEQ VHRYLSLLLD ADPRPVHGVL VYLDRRTTQR IDPAESGDTS NTIAHPAEAR RP
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