Gene Dvul_0835 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_0835 
Symbol 
ID4664160 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp1023967 
End bp1025223 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content62% 
IMG OID639819056 
Producthistidine kinase 
Protein accessionYP_966283 
Protein GI120601883 
COG category[T] Signal transduction mechanisms 
COG ID[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.882013 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0872609 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGTG AAACGAGCCT CGACGATCTT ATCGGCATCG AGCACAGCAA GCTGGGCTTC 
TTTCAGGAGT TGCGGCAGAG CATCGTGCAA CTGAAGGCCG CGCACCGTGA GTCCGAACGT
AGCCGCCTTG AGAAGGAGGC CATCCTCGAC GGTATCACCG ACCTCATGAT GGTGCTCTCG
AAGGATTTGC GCATCATCTC CGTGAACCAT GTGTTCTACG ACGTGACCGG GGTAAAGGCC
CCGGAGGGGC GGTTCTGCTA CGAGATATTC CGCGGGCAGG ACCACCCTTG CCCGGAATGC
CCGGCGCACC GGTCGTTCGT CACCGAGGAG GTCTGTTGCG AGACCTCGCA TTTTCGCATC
AACGGGCGCA AGTTCCAGTT CGAGATGGTG GCGTCGCCCA TCAAGGACCC TGCCACGCAC
GACCGGCAGA TTCTCATCTT CAAGCGAGAC GTGACGCTCC AGAAGGAGTT TCAGGCCAAG
TTCCATCAGG CCGAGAAGAT GGCTACGGTG GGTATGCTCG CCGCAGGGGT GGCGCATGAG
GTCAACAACC CGCTGACAGC CATCAACGGC TTCGCCGAGG GCATCCTGCG CCGGGTCGAA
CGGTTGCGCG GTTCCGTCGA CCCTGACCTG CACGCCGACC TTGCGGACTA TGCGGGCACC
ATACTGGGCG AGTGTCGCCG TTGTCAGGAG ATAGTCCACT CGCTGCTCAC CTTCAGCAGG
CCCCATTCGT CGGCGTTCTC GCCCGTGAAC CTCAACGTGG TGGTGGATGA CACCCTGAAA
CTGCTGCACA ACCACCTGAA GCAACCCAAA TATCGTCACG TGCGCATCGA CACCCGCCTG
TGCCCCACGG CACCCGTCAT ACTGGGGTGC GAGGCGCAGT TGAAACAGGT GATGCTGAAC
CTGCTGGTGA ACGCACTCGA TGCACTGGAG GCGGTTGCGC CATCGGCGGG CGACTCCGGA
GATGACGCCC CGCCTGATGC CCACGGCGGA AAGACCGCGG TCATCACGGT GGCGCCCTTC
AGGGACGAGC GTCATGCCGG GTTCACGGTG CGTGACACGG GCAGCGGCAT TCCGCAGGAG
CATCTCCATT CGCTGTTCGA ACCGTTCTTC ACCACCAAGC CCGTGGGGCG TGGCATCGGC
ATCGGGCTTT CGACGTGCTA CACCATCGTC ACGGAACACG GCGGCGACAT CAGTGTGGAA
AGCAAAGAGG GCGAAGGGTC CGTGTTCACC GTCACCTTGC CGCTTCCGAG GGAGTGA
 
Protein sequence
MTRETSLDDL IGIEHSKLGF FQELRQSIVQ LKAAHRESER SRLEKEAILD GITDLMMVLS 
KDLRIISVNH VFYDVTGVKA PEGRFCYEIF RGQDHPCPEC PAHRSFVTEE VCCETSHFRI
NGRKFQFEMV ASPIKDPATH DRQILIFKRD VTLQKEFQAK FHQAEKMATV GMLAAGVAHE
VNNPLTAING FAEGILRRVE RLRGSVDPDL HADLADYAGT ILGECRRCQE IVHSLLTFSR
PHSSAFSPVN LNVVVDDTLK LLHNHLKQPK YRHVRIDTRL CPTAPVILGC EAQLKQVMLN
LLVNALDALE AVAPSAGDSG DDAPPDAHGG KTAVITVAPF RDERHAGFTV RDTGSGIPQE
HLHSLFEPFF TTKPVGRGIG IGLSTCYTIV TEHGGDISVE SKEGEGSVFT VTLPLPRE