Gene Dvul_0828 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_0828 
Symbol 
ID4664269 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp1015246 
End bp1017204 
Gene Length1959 bp 
Protein Length652 aa 
Translation table11 
GC content64% 
IMG OID639819049 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_966276 
Protein GI120601876 
COG category[C] Energy production and conversion 
COG ID[COG1148] Heterodisulfide reductase, subunit A and related polyferredoxins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAATAG GTGTTTTCGT CTGTCACTGC GGCAGCAACA TCGGCGGCAC CGTGGACGTG 
CCCGGTGTGG CCGACGTCGC ACGTGCCTAC CCGGATGTGG TCTTCGCCTC GGACACCATG
TACGCATGCT CCGAACCGGG GCAGGCCGCC ATCGTCGACG CCATCCGCGA ACATGCGCTG
GATGGCGTGG TGGTGGCGTC GTGCACACCA CGGATGCACG AACCCACCTT CCGCCGCACG
GTGGAGAGGG CAGGGCTCAA CCGCTACATG TTCGAAATGG CCAACATCCG GGAACATGTC
TCGTGGATAG GCAAGGACCG TGAGGCCAAC AGCAACAAGG CCGCTGAACT CGTCCGCATG
GCGGTGGAGA AGCTGCGCCT CAACGCGCCC CTCTACCCCA AGTCGTTCGA CGTGACGAAG
CGCGTGCTCG TCATCGGTGG CGGCGTGGCG GGCATTCAGG CGGCCCTCGA CTGTGCCGAC
GGCGGCGTCG AGGTGGTGCT CGTCGAGCGT GAATCGACCA TCGGCGGCAA GATGGCAAAA
CTCGACAAGA CCTTCCCCAC CGTGGACTGT TCGAGTTGCA TTCTCGGCCC CAAGATGGTG
GACGTGGCGC AGCATCCCAA CATCCGCCTG TACGCCCATG CCGAGGTCGA GAGCATAAGC
GGCTATGTGG GCAACTTCAC GGTGAACATC CGGCGCAAGG CCACCTATGT GGACTGGGAC
CTGTGCACCG GCTGCGGCCT GTGCATGGAG AAATGCCCCA GCCGCAAGTC TCCCGACGCC
TTCAACGAGC ATGTGGGCGT CACCACCGCC ATCAACATCC CCTTTCCGCA GGCCATTCCC
AAGAAGGCGA TCATCGACCC CACGGCGTGC CGCCAGTTCG TGAAGGGCAA ATGCGGTGTG
TGCGCCAAGA TGTGCCCCAC CGGTGCCATC CGCTACGACA TGGAGGATGA GATTGTCGTG
GAGGACGTGG GTGCCATCGT CACCGCCACC GGCTACGACC TCTTCGACCA TACCCGCTAT
GCGGAGTACG GCGGCGGCCG GTATCCCGAC GTCATCACCT CGCTCCAGTA CGAACGGCTG
CTCTCGGCAT CCGGCCCCAC GGGCGGGCAT GTGCGTCGCC CCTCGGACGG CAGGGAACCG
AAGACCGTGG TGTTCATCCA GTGCGTGGGG TCGCGTGACC GCTCGGTGGA CCGTCCGTAT
TGCAGCGGCT TCTGCTGCAT GTACACCGCC AAGCAGGCGG TGCTGACCAA GGACCACATC
CCCGATTCGC GCAGCTATGT CTTCTACATG GACATCCGTG CACCGGGGAA GATGTACGAG
GAGTTCACCC GTCGGGCCAT GGAGGAGTAC GGCGTGCAGT ACGTGCGCGG CCGGGTCTCC
ATGATCGTCC CGCAGGGCGA TACGTATCTG GTGCGCGGTG TGGATACGCT GATGGGTGAG
CAGGTGGAGG TGCCCGCCGA CCTCGTGGTG CTGGCAGTCG GTGCCGAGTC CTCGCGCGGT
GCGCCGCAAC TCGCCGAAAA GCTGCGCATC TCCTACGACA ACTATGGTTT CTTCATGGAA
AGCCATTGCA AGCTGCGCCC GGTGGAGACC AACACCGCAG GTGTCTACCT CGCCGGTTCG
TGTCAGGGAC CCAAGGACAT CCCGTCCTCG GTGGCGCAGG GCAGTGCCGC AGCGTCCAAG
GTGCTCGGAC TGTTCGCGCG CGGAAAGCTC GAGAGCGACC CGCAGATATC GCAGGTCGAT
GTGCGTCGCT GCATCGGCTG TGGCAAGTGC ATCACCACCT GCCCCTACGG TGCCATCGAA
TGGATGGAAC TGCGCGGCGA GACCAAGGCC CGCGTCATCG AGACCGTGTG TCAGGGCTGC
GGTATCTGCA CGGTCACCTG CCCGCAGGGG GCCATCCAGC TTCAGCACTT CACCGACAAT
CAGATCCTCG CGGAGGTCAA CGCACTATGC CTGTCCTGA
 
Protein sequence
MRIGVFVCHC GSNIGGTVDV PGVADVARAY PDVVFASDTM YACSEPGQAA IVDAIREHAL 
DGVVVASCTP RMHEPTFRRT VERAGLNRYM FEMANIREHV SWIGKDREAN SNKAAELVRM
AVEKLRLNAP LYPKSFDVTK RVLVIGGGVA GIQAALDCAD GGVEVVLVER ESTIGGKMAK
LDKTFPTVDC SSCILGPKMV DVAQHPNIRL YAHAEVESIS GYVGNFTVNI RRKATYVDWD
LCTGCGLCME KCPSRKSPDA FNEHVGVTTA INIPFPQAIP KKAIIDPTAC RQFVKGKCGV
CAKMCPTGAI RYDMEDEIVV EDVGAIVTAT GYDLFDHTRY AEYGGGRYPD VITSLQYERL
LSASGPTGGH VRRPSDGREP KTVVFIQCVG SRDRSVDRPY CSGFCCMYTA KQAVLTKDHI
PDSRSYVFYM DIRAPGKMYE EFTRRAMEEY GVQYVRGRVS MIVPQGDTYL VRGVDTLMGE
QVEVPADLVV LAVGAESSRG APQLAEKLRI SYDNYGFFME SHCKLRPVET NTAGVYLAGS
CQGPKDIPSS VAQGSAAASK VLGLFARGKL ESDPQISQVD VRRCIGCGKC ITTCPYGAIE
WMELRGETKA RVIETVCQGC GICTVTCPQG AIQLQHFTDN QILAEVNALC LS