| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_0819 |
|---|
| Symbol | |
|---|
| ID | 4664890 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris DP4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008751 |
|---|
| Strand | - |
|---|
| Start bp | 1003089 |
|---|
| End bp | 1005131 |
|---|
| Gene Length | 2043 bp |
|---|
| Protein Length | 680 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639819040 |
|---|
| Product | radical SAM domain-containing protein |
|---|
| Protein accession | YP_966267 |
|---|
| Protein GI | 120601867 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1032] Fe-S oxidoreductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGTCCG ACACGCTCCG CTTTCGTACC CCCCTCGCCC AGCCCCGCTT CCTGCCCATG
TCGCGTGCCG AGATGCACGC CATAGGGTGG GATGCGCTGG ACGTGCTGCT CATCTCCGGC
GACGCCTACG TCGACCACCC GACCTTCGCC GCCGCCCTTC TCGGACGCTG GCTGGTGGCC
CACGGCTACC GCACGGGCAT CGTGGCGCAG CCACGCTGGA ACACGCCGGA AGATGTGCTG
TGCATGGGCA GGCCCCGACT CTTCGCGGGG ATTGCCGCCG GGGCCATCGA TTCGATGCTG
GCCCACTACA CCGCCTTCCG CAAGAAACGC CACGACGACG CCTACACCCC CGGCGGCAAG
GCCGGTGCAC GTCCCAACAG GGCGGTCATC GTCTATACCA ACCTCCTGCG GCAGGCCTTC
GCCGGACTTC CGGTCGTCAT CGGGGGTATC GAAGCCTCGC TCAGGCGCGC CACACATTAC
GATTTCTGGA CGGACTCGCT ACGGCGCTCC ATCCTGCTTG ACGCCAAGGC CGACCTGCTC
GTCTACGGCA TGGGCGAATA CGCCCTGCGC GAGGCGGCGG CCCGGTACGA CGCGGCCATG
AACGAAGGTG GGGCCGCCAC GGCGGCAGAG GCCCTGCATG GCATCGGCGG TACGGCATGG
GTCGGCACGG AGTCAGACAT GCCCGAGGGC GCATCAATCA TGCGCCTGCC CTCGCACGAG
GACATCTCCG CCGATGTACG CCTGCTCATG GAGGCGACCC TCCAGCAGGA ACGTCATGTC
CATCGCGGCG ACGCATGGGC CATCCAGCCT GTGGGGAATC GCGCCGTGAT CATGGCCCCC
CCCGCCCCGC CCATGTCCCC TGAAGACCTC GACAGGTTGT ACGCGCTCCC CTTCACCCGC
GAGGCACATC CCTCATACCG CGAGACCGTG CCCGCCGCGG ACATGATACG CACGAGCATC
ACCACCCACA GGGGATGCGG CGGCGGGTGT TCGTTCTGTT CGCTGGCCCT CCATCAGGGA
CGACGCATCG CCTCGCGCAG CCGTGACTCT GTCCTCGCGG AGGCACGCGA CCTCGCTGCC
GCTGCGCGAA AGGGCGTCTC CATCAGTGAT GTGGGCGGCC CCAGCGCCAA CATGTGGCAG
GCCCGCTGCA CGCTGAACCC CGCCAAATGC CGTCGTGCCA GTTGCATGTT CCCCTCCGTC
TGCAAAGGTT TTGCGGTCGA CCAGCGCAAG GCAGTGCGGC TGCTTCGGGA AGTGCGCGAC
ACGCCGGGAG TGCGCAACGT ACGCGTGGCC AGCGGCGTCC GTTTCGACCT CGCCTTGCGC
GAAGGCGAGG CACTGCGCGC CTACACCATG GAATTCACCG GCGGTCAGCT CAAGGTCGCC
CCGGAGCACA TCTGCGACGA AGTGCTCGAA TACATGCGCA AGCCGGGACT TCCGGTCTTC
GAGAAGTTCC TTGAGGCCTT CGCGGCCTTC TCCGACGAGG CGGGCAAGGA ACAGTATGTG
GTACCGTACC TTCTGAGCGC CTTTCCGGGC TGCACCGACG ACCACATGCG CACGCTTTCA
CGCTGGCTTC AGGCGCGGGG CTGGTCGCCG CAGCAGGTAC AGTGCTTCAT CCCCACACCG
GGCACGGTGG CTACCGCCAT GTACGCGGCA GGCATCGACC CGGAGGGCAA CCCCATCCCC
GTGGCCCGCA CCGACGCAGA GCGCCTGCGC CAGCACGGCA TCCTCATGCC CGACACAGGA
CGCCCCCCCT CACGTGACGC CGACAACCGC CGCCGGGGCG ATGCCAGACA GAGTGAGACT
GGACGCGGCA AGGCCGGAAC GCGGGACGGA CGGCCGCATC GTTCCGACCG TGACACCGGA
AATGCCAACA GGCATGACGG TGGACGAAGT GACAGGAGGG GCGGCAGGCG CGATGAAGAC
AGGCCCGACC GTGGCAGGCG CAACGGGGCG AGGCCGGATG GCGGCGCGAA CAGAGGCGGG
GCCGACGCCG AAGAGCGCCG GGAGGGCAGG AAGGGGGGCA GCAAGAGGCC GCCCCGCCGC
TGA
|
|---|
| Protein sequence | MQSDTLRFRT PLAQPRFLPM SRAEMHAIGW DALDVLLISG DAYVDHPTFA AALLGRWLVA
HGYRTGIVAQ PRWNTPEDVL CMGRPRLFAG IAAGAIDSML AHYTAFRKKR HDDAYTPGGK
AGARPNRAVI VYTNLLRQAF AGLPVVIGGI EASLRRATHY DFWTDSLRRS ILLDAKADLL
VYGMGEYALR EAAARYDAAM NEGGAATAAE ALHGIGGTAW VGTESDMPEG ASIMRLPSHE
DISADVRLLM EATLQQERHV HRGDAWAIQP VGNRAVIMAP PAPPMSPEDL DRLYALPFTR
EAHPSYRETV PAADMIRTSI TTHRGCGGGC SFCSLALHQG RRIASRSRDS VLAEARDLAA
AARKGVSISD VGGPSANMWQ ARCTLNPAKC RRASCMFPSV CKGFAVDQRK AVRLLREVRD
TPGVRNVRVA SGVRFDLALR EGEALRAYTM EFTGGQLKVA PEHICDEVLE YMRKPGLPVF
EKFLEAFAAF SDEAGKEQYV VPYLLSAFPG CTDDHMRTLS RWLQARGWSP QQVQCFIPTP
GTVATAMYAA GIDPEGNPIP VARTDAERLR QHGILMPDTG RPPSRDADNR RRGDARQSET
GRGKAGTRDG RPHRSDRDTG NANRHDGGRS DRRGGRRDED RPDRGRRNGA RPDGGANRGG
ADAEERREGR KGGSKRPPRR
|
|---|
| |