Gene Dvul_0779 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_0779 
Symbol 
ID4662791 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp956517 
End bp957536 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content63% 
IMG OID639818996 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_966228 
Protein GI120601828 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0777268 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.809759 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGCAC CCGCCTCGTC ACGCCTGACA GCCCTCGCCC GGAGAATGCT CCGCAAGCTT 
GCATGGATGG TGGTGGTGTT TCTGGGCATC ACCGTCATCA GCTTCTGGGT CATCCACCTC
GCACCGGGGT CGCCCACCGA CCTTGAGACG ACCATGAATC CGCTTGCAGG TGCAGAGGCA
CGGAAACGCC TCGAGAGCAT CTACGGGCTC GACCAGCCGT TGCACGTCCA GTATGCACAG
TGGCTTGGCA GACTGGTGCG TCTCAACTTC GGCAATTCCA TGTCCAGTGA TGGCAGACCC
GTCATGGAGC GCATCCGCGA ACGTCTGCCT CTCACCGTGG GCATGAACGT GGCGGCCCTG
TTTCTGACGC TTCTGCTTGC CGTACCCATC GGCGTCGCAT CCGCACACTG GCAAGGGGGC
TGGTTCGACC GGGGCATGAC CGTGCTCGTG TTCATCGGCT TTGCCATGCC GGGATTCTGG
CTGGCGCTGC TGCTGATGCT CTTCTTCGGC ATCCATCTCG GCTGGCTTCC TCTCTCGGGG
CTGACGTCGC TGGACTACGC CACGCTCTCG CCGTGGGGCA AATTCCTTGA CGTGGCCCGC
CACCTTGCGT TGCCGCTCTT CATCTACACC TTCGGCAGCC TTGCAGGCAT GTCGCGTTTC
ATGCGTTCTG CCATGCTCGA AGTGTTGCGG CAGGACTACA TCCTCACCGC ACGGGCCAAG
GGGCTGCCGA CACGGACCGT CATCTTCCGG CACGCCCTGC GCAACGCGCT GCTGCCGGTT
ATCACCATCC TCGGCCTCTC GCTGCCGGGG CTGATAGGCG GCAGCGTCAT CATCGAATCC
ATCTTCGCCC TGCCGGGACT GGGGCAACTC TTCTACACCG CCGTCATGGC GCGCGACTAC
CCGCTCATCA TGGGCAACCT CGTCCTCGGT GCGGTACTGA CTCAGGCTGG CAACCTGATT
GCGGACCTGT GCTACGGACT CGCCGACCCG CGCATCCGCA ACAGTGGAGG AGACCGATGA
 
Protein sequence
MPAPASSRLT ALARRMLRKL AWMVVVFLGI TVISFWVIHL APGSPTDLET TMNPLAGAEA 
RKRLESIYGL DQPLHVQYAQ WLGRLVRLNF GNSMSSDGRP VMERIRERLP LTVGMNVAAL
FLTLLLAVPI GVASAHWQGG WFDRGMTVLV FIGFAMPGFW LALLLMLFFG IHLGWLPLSG
LTSLDYATLS PWGKFLDVAR HLALPLFIYT FGSLAGMSRF MRSAMLEVLR QDYILTARAK
GLPTRTVIFR HALRNALLPV ITILGLSLPG LIGGSVIIES IFALPGLGQL FYTAVMARDY
PLIMGNLVLG AVLTQAGNLI ADLCYGLADP RIRNSGGDR