| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_0681 |
|---|
| Symbol | |
|---|
| ID | 4663674 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris DP4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008751 |
|---|
| Strand | + |
|---|
| Start bp | 843755 |
|---|
| End bp | 845020 |
|---|
| Gene Length | 1266 bp |
|---|
| Protein Length | 421 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639818898 |
|---|
| Product | diaminopimelate decarboxylase |
|---|
| Protein accession | YP_966131 |
|---|
| Protein GI | 120601731 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0019] Diaminopimelate decarboxylase |
|---|
| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.238588 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCAACG TACGATCCAC CTACACCGAC GCCGTCGGCT TCTTCGGACT CACCTCGCCC
ACCGAACTGG TCGAGACCTA TGGCAGTCCG CTCTATGTCT ACAGCGAGGC CATCCTCCGC
CAGCGTTGCC GCGAGATGAA GGCCCTCTCG TCGCATCCCG GCTTCCGCGT GAACTATTCC
GCCAAGGCCA ACAGCAACCT CGCGCTGCTA CACATCATCC GCGAGGAAGG GCTGGTGGTC
GACGCCATGT CGCCCGGCGA ACTGTTCATG AACCTTCGGG CGGGCTTCTC CCCCGACCAG
ATTCTCTACG TGTGCAACAA CGTCTCCGCC GAAGAACTGG GCAACGCCGT GTCGCATGGC
CTGCTGGTGA GCGTCGATTC GCTCTCGCAG CTTGACCTCT ACGGCGAGGT GAACCCCGGC
GGGCGCGTGA TGGTGCGCTT CAACCCCGGC ATCGGGGCGG GCCACCACAA GAAGGTGGTC
ACGGCGGGCA AGGAGACGAA GTTCGGCGTC GACCCCGCAT CCATCGACGA GGTGCGTACC
ATCCTCGCAC GGCACAATCT CACGCTGGCG GGCATCAACC AGCACATCGG CTCGCTCTTC
CTCGAACCGG AAAGCTATGT CGAGGCCGCG CGTTTTCTGC TCACGCTGGC GGAACGGTTC
GATGACGTGG AGGTCATCGA CTTCGGCGGC GGTTTCGGCA TCCCCTACCA CAAGTACGAC
AGCCAGCGCC GTCTCGACCT CGCCGCCATG GGAGCGCAGT TCGACGACCT CATCTCCGGC
TGGGCGCACC GCCGTGGCTA TCGCGGGCGG TTCCTCGTCG AACCGGGGCG CTATGTGGTG
GCCGAATGCG GCCTGCTGCT GGGTTCGGTG CATTCGGTGA AGTCCAACGG TGCCAACCGC
TACGTGGGTA CCGACCTCGG CTTCAACGTG CTGGCGCGTC CCGTCATGTA CGATGCGCAC
CACGACATCG AGGTGTACCG CGAAGACGGC GAACCCTCCG GCCTTCTGCT GCCGCAGACC
GTGGTGGGCA ACATCTGCGA AAGCGGCGAC ATCATTGCCA AGAACAGGCC CCTGCCTCCG
GTGGAAGAGG GTGACATTCT CGGTGTTCTC GACGCCGGTG CCTACGGGTA TGTCATGAGT
TCCTCCTACA ACCAGCGGAT GCGCCCCGCC GAGGTACTCA TCGACCTCGA GGGCAGGCCG
CGCCTCGTGC GACGCCGCGA GACGCTGGAT GATCTTGTGG TTATGTACGA GGGCCTGGGG
CTCTAG
|
|---|
| Protein sequence | MPNVRSTYTD AVGFFGLTSP TELVETYGSP LYVYSEAILR QRCREMKALS SHPGFRVNYS
AKANSNLALL HIIREEGLVV DAMSPGELFM NLRAGFSPDQ ILYVCNNVSA EELGNAVSHG
LLVSVDSLSQ LDLYGEVNPG GRVMVRFNPG IGAGHHKKVV TAGKETKFGV DPASIDEVRT
ILARHNLTLA GINQHIGSLF LEPESYVEAA RFLLTLAERF DDVEVIDFGG GFGIPYHKYD
SQRRLDLAAM GAQFDDLISG WAHRRGYRGR FLVEPGRYVV AECGLLLGSV HSVKSNGANR
YVGTDLGFNV LARPVMYDAH HDIEVYREDG EPSGLLLPQT VVGNICESGD IIAKNRPLPP
VEEGDILGVL DAGAYGYVMS SSYNQRMRPA EVLIDLEGRP RLVRRRETLD DLVVMYEGLG
L
|
|---|
| |