Gene Dvul_0568 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_0568 
Symbol 
ID4664555 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp716757 
End bp719198 
Gene Length2442 bp 
Protein Length813 aa 
Translation table11 
GC content64% 
IMG OID639818778 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_966018 
Protein GI120601618 
COG category[T] Signal transduction mechanisms
[N] Cell motility 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.390162 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.929296 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGTCTTG GCAGTTCATT GAAAATCAAC ACTAAAATGT TCATTGGCGT GCTGGGTGTC 
GTGGCCAGCA CGGCCGTTTT CGTCGGTCTC ATCCTCTCAT GGCGGATGCA GGCCGAACTT
GAGGATTTCG GACACGAGAA CCTCGCCAGC TTCATGGACA CCATGGAACG TTCCGTAGCC
ATGCAGGACC AGCAGGTCAG GGCACAGCTA CAGACCAACA TGGAGTATCT CACCACGGCG
CTGGTGGGAC AGGGCAGCTT CGTGCTGGAC GACGAGTCGG GCATGGAGAC CACCGTGACC
AATCAGGCCA CGGGCGCACA GGAGAAACTT CGCCTGCCGG GCCTCGCCCT CGAATCTGAC
GGCATGCTCC AGAGTTTCTC GCCATTCTCG TTCGTGGGCA GGCAGAAGCG CGTCACCGGG
TCGGAGTGCA CCATATTCGT CAAGGTGCCG GGAAAACTCG TCCGCATCGC CACCACGGTG
CATACCGCTG ACGGCAAGCC CGCCATCGGC ACCTACATCC CCGCAGAAAG CCCGGTGTAT
CAGGCCATCG AGAAGGGGCA GGAATATGTG GGCGTCGCCA ATGTGGTGGG GCAGCCCTTC
CTCACCCACT ATCGCCCCAT CCGCGACGCA CGCGGTCAGT TCACCATCGC CCTCTTCGCG
GGCGTGCCGC TTCTCCAGCC CTCCTTCACC GAGATGTTCG CAGGTGCCAA GGTCGGCGGT
GCCGGATATA CCTTCATCCT CGACGAGACG GGCAAGCGCC TCGCGCATCC CACCCGGGTC
GGCACCAACG TCAACGACGA CAGCTACGGC AAACGCCTGA TGGAGACCCG CAACGGCTTC
GTCGAATGGG AGTACAACGG TTCCAAGGTC GGCTACCTCT TCGAGTACGC ACCGTGGAAG
CTGCGCTTCG GCGTCGCCAT GACCCATGAC GAGATGCTGC GCGGGGCTGA TGCCGACGTG
CGCATGTGGG CCGCCGGATG CGCCGTGGTG GCCGTTGCCA TCGCCTCCTT CTTCGTACTT
CTGCTGGTTC GTGAGGTCAC ACGCCCCATG CAGCGCCTCT CCGCCTACGC CGCCGCCGTC
TCAGCGGGGG ACTTCGCCGC ACGCATGGAC TACCCTGCCG ACGACGCCAT CGGGCGCACC
ATCGGTGCGG TCAACGGCAT GGTCGCCGAG ATGAAGACCA AACTGGGCCT CACGCAGGGC
GTGCTGAACG GCATGACGCT TCCCTTCGCC GTCTGCGACA CAGATGCCAA GGTCATCCAC
ACCAACACGG CCCTCATCGA CCTGCTGCAA CGCCCCGGCA CCCCCGCTGA CTGGACGGGC
AAGCCCCTCG ACATCCTCGT CTACGGTCAG ACCAAGGAAG ACATGGCCAC CGCCCGTTGC
CTGCGCGAAG GATGCGCCCT GCGCAACATC GAGGTCGACC TCACCACATC GAAGGGCGAG
ACCGTGCACA CTCTCGTGGA TGTGGCCCCC CTGTCCGACC TCGACGGCAG CCTCATCGGT
TCGTTCACCA TCTACGCCGA CATCACCGCC CTCAGGCAAC AGCAGCAGCG CATCGAGGCG
CAGCGCGACG CCATGGCCGA AGTGGCGACC GAGGCCGATG GCATCGCCCG CGACCTCAAC
GCCGCCGCCA ACGAACTGGC AGCACAGGTT CGCGAGGCCA GCAACGGCAG CGACGTGCAA
CGTGCCCGCA CCACCGAAAC GGCCACTGCC ATGGAACAGA TGAACGCCAC GGTGCTTGAA
GTGGCCCAGA GTGCCGGACA TGCCGCCGAG AACGCAGAGA ATGCCCGCAA GAAGGCCGAC
GAAGGCGCAC GCCTCGTGGG TGACGTGGTC GAAGCCATCG AGGCAGTCCG CGAGATGGCC
CTCGAACTGC AACAGAGCAT GCAGGGGCTT GCCACCGAAG CGGAAGGCAT AGGTCACATC
ATGCAGGTCA TCGAGGACAT CGCCGACCAG ACCAACCTTC TCGCCCTCAA CGCCGCCATC
GAAGCAGCCC GTGCGGGTGA TGCGGGCCGT GGCTTCGCCG TCGTCGCCGA CGAGGTGCGC
AAGCTGGCCG AGAAGACCAT GAACGCCACA CGCGAAGTGG GGCAGGCCAT CCGCAACATC
CAGACGGGCG CCCGCAACAG CATGGAAGCG ACCTCCAACG CCGTCGAAGC GGTGGTGGCA
TCCAACATGC TCACCACCCG TTCCGGTGAG GCACTGTCGT CCATCGTCAA GATGGTGGAC
GACACCGCCG ACCAGGTGCG CGGCATCGCC ACGGCCTCGG AACAGCAGTC CGCAGCCAGC
GAACAGATAA GCCGCGCCAC CGAGGAAATC ACCGCCATCG CCGAAGTCAC GGCGCAGACC
ATGAACCGTT CCAGCGACGC CGTGCAGCAA CTCACGCGGC TTGCGGGCGA CCTTGGCGGG
CTCATCGAAC AGATACGCAC AGGCACCAGC GAGAACGCCT GA
 
Protein sequence
MSLGSSLKIN TKMFIGVLGV VASTAVFVGL ILSWRMQAEL EDFGHENLAS FMDTMERSVA 
MQDQQVRAQL QTNMEYLTTA LVGQGSFVLD DESGMETTVT NQATGAQEKL RLPGLALESD
GMLQSFSPFS FVGRQKRVTG SECTIFVKVP GKLVRIATTV HTADGKPAIG TYIPAESPVY
QAIEKGQEYV GVANVVGQPF LTHYRPIRDA RGQFTIALFA GVPLLQPSFT EMFAGAKVGG
AGYTFILDET GKRLAHPTRV GTNVNDDSYG KRLMETRNGF VEWEYNGSKV GYLFEYAPWK
LRFGVAMTHD EMLRGADADV RMWAAGCAVV AVAIASFFVL LLVREVTRPM QRLSAYAAAV
SAGDFAARMD YPADDAIGRT IGAVNGMVAE MKTKLGLTQG VLNGMTLPFA VCDTDAKVIH
TNTALIDLLQ RPGTPADWTG KPLDILVYGQ TKEDMATARC LREGCALRNI EVDLTTSKGE
TVHTLVDVAP LSDLDGSLIG SFTIYADITA LRQQQQRIEA QRDAMAEVAT EADGIARDLN
AAANELAAQV REASNGSDVQ RARTTETATA MEQMNATVLE VAQSAGHAAE NAENARKKAD
EGARLVGDVV EAIEAVREMA LELQQSMQGL ATEAEGIGHI MQVIEDIADQ TNLLALNAAI
EAARAGDAGR GFAVVADEVR KLAEKTMNAT REVGQAIRNI QTGARNSMEA TSNAVEAVVA
SNMLTTRSGE ALSSIVKMVD DTADQVRGIA TASEQQSAAS EQISRATEEI TAIAEVTAQT
MNRSSDAVQQ LTRLAGDLGG LIEQIRTGTS ENA