Gene Dvul_0532 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_0532 
Symbol 
ID4663686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp672460 
End bp673779 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content65% 
IMG OID639818742 
Productputative ABC transporter solute-binding protein 
Protein accessionYP_965982 
Protein GI120601582 
COG category[R] General function prediction only 
COG ID[COG4134] ABC-type uncharacterized transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.96386 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.487675 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTGCTGT GCATGGCAAG CGCGCTGCTT GTTGCCGCCT GTGGCGACAG TGGCGATGCT 
GTGCCGAACA CTGGTGCGAC CGGCGTGAAT GCCACCACGC CCACGGGGCC AGTGGCCAAT
GGGTCCACGG GGGCGATGGT GGGCGATGTC GGCAGCGGGG CGTTCACCCG TGTGGCACCC
CCCGGTTTCG AGAACACCAC GTGGACCGAC ATTGAGAAGA GTGCACGCGG GACCACCGTG
CGCATGTTCA TGTACGGCGG CTTCGCGCAT GTGAACCGCT GGATGGATGC GTGGGTGGCG
CCCCGTCTTC AGGAGCGGCA TGGCATCCGC CTTGAGCGCG TCCCCATGGA CGCCGCCGTA
TTCGTCAACC GGTTGCTGGC TGAAAAACAG GCCGGGCGTG ACACGGGGAC GATGGACCTT
CTGTGGATCA ACGGTGAGAA CTTCCGCAAC GCCCGTGAGG CGGGACTCCT GTGGGGGCCC
TTCAGTGGCG CGCTCCCTTC GTCGGCTCTT GTCGAGGCAG GGCACCGTGA CATGGACTTC
GGCTATCCTG TCGAGGGGTA CGAGTCGCCA TGGGGCAGTG CCCAGCTGGT GCTTGAGTAT
GACACGGCCC GCACTCCAGA ACCCCCGCGT TCCGTCGAGG AACTGGCGGC ATGGATCAAG
GCGCACCCCG GACGGTTCAC CTATCCTCAG CCGCCCGACT TCACGGGCTC GGCCTTCGTG
CGGCAGCTTC TCTATGCCGT GACGGGCGGC CACGAGCAGT ACATGGGGGC TTTCGACAAG
GCCCTCTTCG ATACCAAGAC CCCGCAGTTG TGGGCCTTTC TGAACGACCT CAAGCCGTAT
CTGTGGCAGG AGGGACGCGC CTACCCCCGC GATGCCGCCA TGCAGGATTC GCTTTTTGCT
CGGGGCGAGG TCGACTTCTC CATCTCGTAC CATCCGGTGC ACGCCCAGGC CAACGTCGGC
GAGGGCACGT ATCCGCCCAC GGTGCGAACC CTCGTGCTGC GCGAGGGAAG CATTCGCAAT
ACCCATTTCG TGGCCATCCC CTTCAATGCC CCCAACAGGG CGGGTGCCAT GGTCGTGGCG
GATTTCCTGC TGTCGCCCGA GGCGCAGACC GCCAAACTGG ACCCTGCCAA CTGGGGCGAT
TTCCCGGTGC TGGATGTCCG CCGTCTGACA GAAGACCAGA GGGCGCGCCT TGCCGCCGTC
GACCTTGGCA AGGCAACGCT TTCGCCGGAG ATTCTCGCCG GGGCGGCGTT GCCGGAAATT
CCTGCTTCGT GGCTTGAGGC ACTGGAGAAG GGGTGGCAGG AGAACGTGGC CGGTCGCTGA
 
Protein sequence
MLLCMASALL VAACGDSGDA VPNTGATGVN ATTPTGPVAN GSTGAMVGDV GSGAFTRVAP 
PGFENTTWTD IEKSARGTTV RMFMYGGFAH VNRWMDAWVA PRLQERHGIR LERVPMDAAV
FVNRLLAEKQ AGRDTGTMDL LWINGENFRN AREAGLLWGP FSGALPSSAL VEAGHRDMDF
GYPVEGYESP WGSAQLVLEY DTARTPEPPR SVEELAAWIK AHPGRFTYPQ PPDFTGSAFV
RQLLYAVTGG HEQYMGAFDK ALFDTKTPQL WAFLNDLKPY LWQEGRAYPR DAAMQDSLFA
RGEVDFSISY HPVHAQANVG EGTYPPTVRT LVLREGSIRN THFVAIPFNA PNRAGAMVVA
DFLLSPEAQT AKLDPANWGD FPVLDVRRLT EDQRARLAAV DLGKATLSPE ILAGAALPEI
PASWLEALEK GWQENVAGR