| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_0496 |
|---|
| Symbol | |
|---|
| ID | 4662687 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris DP4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008751 |
|---|
| Strand | - |
|---|
| Start bp | 633013 |
|---|
| End bp | 633621 |
|---|
| Gene Length | 609 bp |
|---|
| Protein Length | 202 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639818706 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_965946 |
|---|
| Protein GI | 120601546 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.250936 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCTAG GCCGCCCCCC ACGTGATAGA AGGTCGGAAA TCATTGAAAT CGCAGGCCCC
CTGTTCCTAG AGCATGGCTA TCAGGGCACG TCCATGTCCC GCATAGCCGC CGCCCTCGGC
GGGTCGAAGG GCACTCTCTA CGCCTACTTC GAAAGCAAGG AAGCCCTCTT CGAAGCCTAC
ATGGAAGACA GGGTCCGTCA GCGTGGGGCC GCCGTGTTCA ACCTGCCGCC CCACCCCGCC
GACCTGCACG ACGTACTGCG CCTGCTGGGC AAACGGTATC TCGGCCTCAT CACCGACGAG
GTATCGCTGT CGCTGGTACG ACTCCTCTAC CACGAAGCCC CGCGCTTTCC GGAAATCGGG
CGTATCTTCT ACGAGACCTG CATTCTGCGC GGGCGACGCC ACCTTGCCGA ATACCTCAAG
CGTGCGGATG AGCACGGCGC ACTCCGCATC CCTGATGCCG AAGTCGCTGC CCAGCATTTT
CTCGCCCTGT GCCAAGCCAC CCTCTCCATG CCCGTGATGC TGTGCATCAA GGACGTCATC
ACGGAAGAAG AGACTGAACG GGCCGTGGAG TCGGCGGTTT CGGTCTTTCT CGCCGCCTAC
GCTGTCTAG
|
|---|
| Protein sequence | MALGRPPRDR RSEIIEIAGP LFLEHGYQGT SMSRIAAALG GSKGTLYAYF ESKEALFEAY
MEDRVRQRGA AVFNLPPHPA DLHDVLRLLG KRYLGLITDE VSLSLVRLLY HEAPRFPEIG
RIFYETCILR GRRHLAEYLK RADEHGALRI PDAEVAAQHF LALCQATLSM PVMLCIKDVI
TEEETERAVE SAVSVFLAAY AV
|
|---|
| |